Job Description P0A6U8 Confidence 97.43% Date Thu Jan 5 11:03:56 GMT 2012 Rank 57 Aligned Residues 265 % Identity 10% Template c3l7mC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:teichoic acid biosynthesis protein f; PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a Resolution 2.85 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	Y	A	H	H	M	N	D	I	Q	L	P	W	S	F	F	N	I	H	G	L	E	F	N	G	Q	I	S	F	L	K	A	G	L	Y	Y	A	D	H	I	T	A	V	S	P	T	Y	A	R	E	I	T	E	P	Q	F	A	Y	G	M	E	G	L	L	Q	Q	R	H	R	E	G	R	L	S	G	V	L	N	G
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	W	H	G	T	P	L	K	R	L	A	N	D	M	K	V	V	R	M	P	G	T	T	T	P	K	Y	K	R	N	F	N	R	E	T	S	R	W	D	Y	L	I	S	P	N	R	Y	S	T	E	I	F	R	S	A	F	.	.	.	.	.	.	.	.	.	.	.	W	M	D	E	E	R	I	L	E	I	G	Y	P
Template Known Secondary structure				S				S	B			G	G	G							T	T															T	T		S					S	S											T	.	.	.	.	.	.	.	.	.	.	.	T			G	G	G				S			G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.												.	.	500	.	.	.	.	.	.	.	.	.	510
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		V	D	E	K	I	W	S	P	E	T	D	L	L	L	A	S	R	Y	T	R	D	T	L	E	D	K	A	E	N	K	R	Q	L	Q	I	A	M	G	L	K	V	D	D	K	V	P	L	F	A	.	.	.	.	.	.	.	V	V	S	R	L	T	S	Q	K	G	L	D	L	V	L	E	A	L	P	G	L	L	E	Q
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	D	V	L	V	N	R	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	E	Y	L	D	E	I	R	T	H	L	N	L	P	S	D	K	K	V	I	M	Y	A	P	T	W	R	D	D	E	F	V	S	K	G	K	Y	L	F	E	L	K	I	D	L	D	N	L	Y	K	E	L	G	D
Template Known Secondary structure		G	G						S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T			S	S												G	G	G			G	G	G	S	S					T	T										T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		511	.	.	.	.	.	.	.	.	520																.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Q	L	A	L	L	G	A	G	D	P	V	L	Q	E	G	F	L	A	A	A	A	E	Y	P	G	Q	V	G	V	Q	I	G	Y	H	E	A	F	S	H	R	I	M	G	G	A	D	V	I	L	V	P	S	R	F	E	P	C	G	L	T	Q	L	Y	G	L	K	Y	G	T	L	P	L	V	R	R	T	G	G
Query Conservation
Alig confidence								.	.	.	.	.	.																																									.	.	.	.	.																				.
Template Conservation								.	.	.	.	.	.																																									.	.	.	.	.																				.
Template Sequence		D	Y	V	I	L	L	.	.	.	.	.	.	R	M	A	Y	L	I	S	N	A	L	D	L	S	G	Y	E	N	F	A	I	D	V	S	N	Y	N	D	V	S	E	L	F	L	I	S	D	C	L	I	T	.	.	.	.	.	D	Y	S	S	V	M	F	D	Y	G	I	L	K	R	P	Q	F	F	F	.	A	Y	D
Template Known Secondary structure		T						.	.	.	.	.	.								T	T				T	T		T	T	T					T	T		S								T		S					.	.	.	.	.	S	S		T	T					G	G	G	T							.		T	T
Template Predicted Secondary structure								.	.	.	.	.	.																																									.	.	.	.	.																				.
Template SS confidence
		576	.	.	.	580	.							.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.						.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640		.	.	.
		401	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.			.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure									.																																																									.	.
Query SS confidence									.																																																									.	.
Query Sequence		L	A	D	T	V	S	D	.	C	S	L	E	N	L	A	D	G	V	A	S	G	F	V	F	E	D	S	N	A	W	S	L	L	R	A	I	R	R	A	F	V	L	W	S	R	P	S	L	W	R	F	V	Q	R	Q	A	M	A	M	D	F	S	W	Q	.	.	V	A	A	K	S	Y	R	E	L	Y	Y	R
Query Conservation									.																																																									.	.
Alig confidence									.																		.	.															.	.	.																					.	.
Template Conservation																											.	.															.	.	.
Template Sequence		I	D	K	Y	D	K	G	L	R	G	F	Y	M	N	Y	M	E	D	L	P	G	P	I	Y	T	.	.	E	P	Y	G	L	A	K	E	L	K	N	L	D	K	.	.	.	V	Q	Q	Q	Y	Q	E	K	I	D	A	F	Y	D	R	F	C	S	V	D	N	G	K	A	S	Q	Y	I	G	D	L	I	H	K
Template Known Secondary structure		T	T	T	T	T	T	T			S	B	S	S		T	T	T	S	S	S	S				S	.	.	S	S													.	.	.																	T	T	T			S
Template Predicted Secondary structure																											.	.															.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.			.	670	.	.	.	.	.	.	.	.	.	680	.	.				.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions