Job Description P0A7U3 Confidence 100.00% Date Thu Jan 5 11:06:12 GMT 2012 Rank 5 Aligned Residues 83 % Identity 30% Template c2xzmS_ PDB info PDB header:ribosome Chain: S: PDB Molecule:rps15e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.															.	.	.	.
Query SS confidence											.															.	.	.	.
Query Sequence		R	S	L	K	K	G	P	F	I	.	D	L	H	L	L	K	K	V	E	K	A	V	E	S	.	.	.	.	G	D	K	K	P	L	R	T	W	S	R	R	S	T	I	F	P	N	M	I	G	L	T	I	A	V	H	N	G	R	Q	H	V	P	V	F	V	T	D	E	M	V	G	H	K	L	G	E	F	A	P	T
Query Conservation											.															.	.	.	.
Alig confidence											.															.	.	.	.
Template Conservation
Template Sequence		R	R	V	K	R	G	I	S	E	K	Y	A	K	F	V	N	K	V	R	R	S	K	E	K	C	P	A	G	E	K	P	V	P	V	K	T	H	Y	R	S	M	I	V	I	P	E	L	V	G	G	I	V	G	V	Y	N	G	K	E	F	V	N	V	E	V	K	F	D	M	I	G	K	Y	L	A	E	F	A	M	T
Template Known Secondary structure										S																S		T	T	T										T	T		B			G	G	G	T	T								S	S	S								G	G	G	T	T	S	B	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	Y	R	G	H	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	P	T	T	H	G	K
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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