Job Description P75884 Confidence 5.82% Date Thu Jan 5 12:15:36 GMT 2012 Rank 28 Aligned Residues 136 % Identity 16% Template c3o44G_ PDB info PDB header:toxin Chain: G: PDB Molecule:hemolysin; PDBTitle: crystal structure of the vibrio cholerae cytolysin (hlya) heptameric2 pore Resolution 2.88 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	R	L	N	E	G	Q	R	I	F	V	V	L	G	Y	I	E	Q	E	Q	S	K	W	L	S	Q	D	N	A	M	L	V	T	H	N	G	R	L	L	K	T	V	K	L	N	N	N	L	L	E	V	T	N	S	G	Q	D	P	L	R	N	A	L	A	I	K	D	G	S	R	W	T	R	D	I	L	W	S	E
Query Conservation
Alig confidence																																																																																.
Template Conservation																																																																																.
Template Sequence		Y	T	D	V	F	N	A	Q	E	S	S	P	I	L	G	Y	T	Q	G	K	M	N	Q	Q	R	V	G	Q	D	N	R	L	Y	V	R	A	G	A	A	I	D	A	L	G	S	A	S	D	L	L	V	G	G	N	G	G	S	L	S	S	V	D	L	S	G	V	K	S	I	T	A	T	S	G	D	F	Q	Y	.	G
Template Known Secondary structure		B			T	T														S									T	T								S	S	S						S	S	T	T						S		S								T	T												S	S	.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.		.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	H	F	R	S	A	T	L	S	S	T	F	S	F	A	G	L	E	T	L	N	I	A	G	R	N	V	L	C	N	V	W	Q	E	E	V	T	S	T	R	P	E	K	Q	W	Q	N	T	F	W	V	D	S	A	T	G	Q	V	R	Q	S	R	Q
Query Conservation
Alig confidence										.	.	.	.																																									.	.	.
Template Conservation										.	.	.	.																																									.	.	.
Template Sequence		G	Q	Q	L	V	A	L	T	.	.	.	.	F	T	Y	Q	D	G	R	Q	Q	T	V	G	S	K	A	Y	V	T	N	A	H	E	D	R	F	D	L	P	D	A	A	K	I	T	Q	L	K	I	W	A	.	.	.	D	D	W	L	V	K	G	V	Q
Template Known Secondary structure		S								.	.	.	.				T	T	S								S	S	S													T	T											.	.	.		S	S
Template Predicted Secondary structure										.	.	.	.																																									.	.	.
Template SS confidence
		656	.	.	.	660	.	.	.					.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.				.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions