Job Description P75884 Confidence 3.40% Date Thu Jan 5 12:15:36 GMT 2012 Rank 63 Aligned Residues 79 % Identity 16% Template c3l48B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:outer membrane usher protein papc; PDBTitle: crystal structure of the c-terminal domain of the papc usher Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	R	I	F	V	V	L	G	Y	I	E	Q	E	Q	S	K	W	L	S	Q	D	N	A	M	L	V	T	H	N	G	R	L	L	K	T	V	K	L	N	N	N	L	L	E	V	T	N	S	G	Q	D	P	L	R	N	A	L	A	I	K	D	G	S	R	W	T	R	D	I	L	W	S	E	D	N	H	F	R	S
Query Conservation
Alig confidence																		.	.	.	.																																			.	.																.
Template Conservation																		.	.	.	.																																			.	.																.
Template Sequence		G	K	R	L	F	A	I	L	R	L	A	D	G	S	Q	P	.	.	.	.	P	F	G	A	S	V	T	S	E	K	G	R	E	L	G	M	V	A	D	E	G	L	A	W	L	S	G	V	T	P	G	E	T	L	.	.	S	V	N	W	D	G	K	I	Q	C	Q	V	N	V	P	.	E	T	A	I	S	D	Q	Q
Template Known Secondary structure												T	T	S				.	.	.	.		T	T						T	T	S								G	G	G									T	T				.	.					T	T										.	T	T			T	T
Template Predicted Secondary structure																		.	.	.	.																																			.	.																.
Template SS confidence
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.					.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.			.	.	780	.	.	.	.	.	.	.	.	.	790	.	.		.	.	.	.	.	.	.	800
		139	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	S	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	L	P	C	T
Template Known Secondary structure							B
Template Predicted Secondary structure
Template SS confidence
		801	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions