Job Description P75884 Confidence 12.59% Date Thu Jan 5 12:15:36 GMT 2012 Rank 8 Aligned Residues 153 % Identity 12% Template c3fzxA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of a putative exported protein with ymcc-like fold2 (bf2203) from bacteroides fragilis nctc 9343 at 2.22 a resolution Resolution 2.22 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																			.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	N	E	G	Q	R	I	F	V	V	L	G	Y	I	E	Q	E	Q	S	K	W	L	S	Q	D	N	A	M	L	V	T	H	N	G	R	L	L	K	T	V	K	L	N	N	N	L	L	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	G	Q	D	P	L	R	N	A	L
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	P	S	G	X	E	V	V	A	N	Y	T	F	A	D	A	A	G	K	T	L	N	S	G	Q	X	V	A	R	C	S	D	G	N	F	S	X	S	X	G	D	V	A	T	F	P	T	A	L	N	X	X	N	A	D	V	Y	X	X	G	D	L	X	N	Y	P	D	A	F	S	N	P	X	N	P	G	D	D	D
Template Known Secondary structure				T	T													T	T															T	T							G	G	G	G	G	S									T	T													T	T	T	S				T	T			T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		A	I	K	D	G	S	R	W	T	R	D	I	L	W	S	E	D	N	H	F	R	S	A	T	L	S	S	T	F	S	F	A	G	L	E	T	L	N	I	A	G	R	N	V	L	C	N	V	W	Q	E	E	V	T	S	T	R	P	E	K	Q	W	Q	N	T	F	.	.	W	V	D	S	A	T	G	Q	V	R	Q	S
Query Conservation																																																																				.	.
Alig confidence									.	.	.																																																									.	.									.
Template Conservation									.	.	.																																																																			.
Template Sequence		E	F	D	D	G	T	L	.	.	.	R	L	Y	Q	K	G	N	K	N	N	R	A	E	I	S	V	F	D	R	E	F	V	T	T	E	T	V	N	T	P	A	G	A	F	Y	C	T	K	V	K	Y	E	X	N	I	W	T	P	K	E	T	I	K	G	Y	G	Y	E	W	Y	A	P	N	I	G	I	.	V	R	S
Template Known Secondary structure		T	S						.	.	.					T	T																								T	T																	S	S													T	T	T			.
Template Predicted Secondary structure									.	.	.																																																																			.
Template SS confidence
		141	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.
		195	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		R	Q	M	.	.	L	G	A	G	V	I	P	V	E	M	T	F	L	K
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		E	Q	Y	N	N	K	K	E	L	Q	S	Y	S	V	L	E	R	I	K
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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