Job Description P75884 Confidence 11.79% Date Thu Jan 5 12:15:36 GMT 2012 Rank 12 Aligned Residues 142 % Identity 15% Template c2v43A_ PDB info PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli Resolution 2.37 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																						.													.	.	.	.
Query SS confidence																						.													.	.	.	.
Query Sequence		D	Q	Q	I	Q	A	L	P	Y	S	T	M	Y	L	R	L	N	E	G	Q	.	R	I	F	V	V	L	G	Y	I	E	Q	E	.	.	.	.	Q	S	K	W	L	S	Q	D	N	A	M	L	V	T	H	N	G	R	L	L	K	T	V	K	L	N	N	N	L	L	E	V	T	N	S	G	Q	D	P	L	R	N	A
Query Conservation																						.													.	.	.	.
Alig confidence																						.													.	.	.	.														.
Template Conservation																																																				.
Template Sequence		N	L	A	S	Q	S	L	N	Y	E	L	S	F	I	S	I	N	K	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	R	R	E	V	V	.	Q	R	G	N	E	I	S	Y	F	E	P	G	L	E	P	F	T	L	N	G	D	Y	I	V	D	S	L	P	S
Template Known Secondary structure								S											T	T													T	T										S	S	S						.			T	T							T	T	S								S	S		T	T	S	S		G
Template Predicted Secondary structure																																																				.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	K	D	G	S	R	W	T	R	D	I	L	W	S	E	D	N	H	F	R	S	A	T	L	S	S	T	F	S	F	A	G	L	E	T	L	N	I	A	G	R	N	V	L	C	N	V	W	Q	E	E	V	T	S	T	R	P	E	K	Q	W	Q	N	T	F	W	V	D	S	A	T	G	Q	V	R	Q	S	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.										.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.										.	.	.
Template Sequence		L	I	Y	T	D	F	K	R	L	S	P	Y	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	S	V	G	R	T	R	I	.	.	.	.	A	D	R	L	C	E	V	I	R	.	.	.	V	V	A	R	D	G	T	R	Y	S	Y	I	V	W	M	D	T	E	S	K	L	P	M	R	V	D
Template Known Secondary structure		G	G	G							T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	T	T								.	.	.				T	T	S		S									T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.										.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.																.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		196	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	L	G	A	G	V	I	P	V	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	L	D	R	D	G	E	T	L	E
Template Known Secondary structure		.				T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			172	.	.	.	.	.	.	.	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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