Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE4
Confidence100.00%DateThu Jan 5 11:28:53 GMT 2012
Rank1Aligned Residues384
% Identity26%Templated2nwwa1
SCOP infoProton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30....... ..40.........50.........60.........70... ......80.........
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Query Sequence  LVKQILVGLVLGILLAWISK. . . . . . PAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANH. . QHGQKTNIRPILFLYL
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Template Sequence  VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLL
Template Known Secondary structure 

STTTTTTTTTTT
S
TTTT
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  LGTFSAALAAVVFSFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFAL. . . . . .
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Template Sequence  TSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNS
Template Known Secondary structure  S
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GGGS
S
S

TT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   164.....170.........180.........190.........200.........210.........220.........230........
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Query Sequence  . . . . . RHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLLV
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Template Sequence  ENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLL
Template Known Secondary structure  S
TTTTSTGGG

TT
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  WWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTL
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Template Sequence  KI. YGIDPISF. IKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANAL
Template Known Secondary structure  T.TT

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TGGGTTT

TTTTTTTSSS

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   252. ......260. ........270.........280.........290.........300.........310.........320.........
 
   319320.........330.........340.........350.........360... ......370.........380.........390......
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Query Sequence  GIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGISN. . DIAMQVVAVGFIIGVLQDSCETALNSSTDVLFT
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Template Sequence  GSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGT
Template Known Secondary structure  T



SSTTTTSS
TTT

TTSGGG
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   330.........340.........350.........360.........370.........380.........390.........400.........
 
   397..400...
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Query Sequence  AAACQAE
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Template Sequence  AIVAKTE
Template Known Secondary structure 
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   410......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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