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Job DescriptionP0AGE4
Confidence3.87%DateThu Jan 5 11:28:53 GMT 2012
Rank47Aligned Residues113
% Identity12%Templatec3d31D_
PDB info PDB header:transport proteinChain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  LVWAIGLGFALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALV
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Template Sequence  LLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLESYIQFRDALPGIVVAMLFVSMPYL
Template Known Secondary structure  TT


TTGGGTS
STTSTTTGGGTTT


TTS
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   233......240.. .......250.........260.....
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Query Sequence  VNPLLVWWKI. . . . . . . . . . . . RRNPFPLVLLCLRESGVYAFFTR
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Template Conservation         
  
     


  

 
       
 

     
   
Template Sequence  ANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIG
Template Known Secondary structure  S
TT

T
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   156...160.........170.........180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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