 |
Job Description | P52106 | Confidence | 61.72% | Date | Thu Jan 5 12:05:21 GMT 2012 |
Rank | 439 | Aligned Residues | 39 |
% Identity | 13% | Template | d1vola1 |
SCOP info | Cyclin-like
| Cyclin-like
| Transcription factor IIB (TFIIB), core domain
|
Resolution | 2.70 |
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | N | K | L | R | I | G | A | S | N | N | E | I | A | R | S | L | F | I | S | E | N | T | V | K | T | H | L | Y | N | L | F | K | K | I | A | V | K |
Query Conservation |   |
|
|   |   |
|   |   |
|   |
|
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|   |   |   |
|   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|   |
Template Sequence |   |
A | C | R | Q | E | G | V | P | R | T | F | K | E | I | C | A | V | S | R | I | S | K | K | E | I | G | R | C | F | K | L | I | L | K | A | L | E | T | S |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
|
|
|  |  |  |  |  | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|