 |
Job Description | P52106 | Confidence | 92.52% | Date | Thu Jan 5 12:05:21 GMT 2012 |
Rank | 210 | Aligned Residues | 47 |
% Identity | 26% | Template | d1p6ra_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
Resolution | UNK |
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | S | A | L | L | T | H | R | E | K | E | I | L | N | K | L | R | . |
. |
I | G | A | S | N | N | E | I | A | R | S | L | . |
. |
. |
. |
F | I | S | E | N | T | V | K | T | H | L | Y | N | L | F | K | K |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   | . | . |   |
|   |
|
|   |
|
|
|   |   |
| . | . | . | . |   |
|
|   |   |
|
|
|   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
Template Sequence |   |
K | K | I | P | Q | I | S | D | A | E | L | E | V | M | K | V | I | W | K | H | S | S | I | N | T | N | E | V | I | K | E | L | S | K | T | S | T | W | S | P | K | T | I | Q | T | M | L | L | R | L | I | K | K |
Template Known Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|