 |
| Job Description | P52106 | | Confidence | 61.55% | Date | Thu Jan 5 12:05:21 GMT 2012 |
| Rank | 442 | Aligned Residues | 23 |
| % Identity | 9% | Template | c3ivpD_ |
| PDB info |
PDB header:dna binding protein | Chain: D: PDB Molecule:putative transposon-related dna-binding protein; |
PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
|
| Resolution | 2.02 Å |
|
| | |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
| Predicted Secondary structure | |
 |
|
|
|
| | | | | | | | |
|
|
| | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
R | I | G | A | S | N | N | E | I | A | R | S | L | F | I | S | E | N | T | V | K | T | H |
| Query Conservation | |
| |
| |
|
| |
|
|
| | |
| |
|
| | |
|
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
|
| |
|
|
| | | |
|
|
| | | |
|
| | |
| Template Sequence | |
K | Q | G | L | T | R | E | Q | V | G | A | X | I | E | I | D | P | R | Y | L | T | N | I |
| Template Known Secondary structure | |
| T | T |
|
| | | | | | | | | T | S |
| | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
| | | | | | | | |
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
