Job Description P52106 Confidence 95.50% Date Thu Jan 5 12:05:21 GMT 2012 Rank 168 Aligned Residues 176 % Identity 9% Template c2r0qF_ PDB info PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	S	L	Q	A	T	A	L	L	Q	H	L	K	Q	S	L	A	I	T	G	K	L	H	N	I	Q	R	S	L	D	D	I	S	S	G	S	I	I	L	L	D	M	M	E	A	D	K	K	L	I	H	Y	W	Q	D	T	L	S	R	K	N	N	N	I	K	I	L	L	L	N	T	P	E	D	Y	P	Y	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	E	R	Q	L	E	N	L	K	T	F	G	A	E	K	I	F	T	E	K	N	R	P	I	L	Q	K	A	L	N	F	V	R	M	G	D	R	F	I	V	E	S	I	D	R	L	G	R	N	Y	N	E	V	I	H	T	V	N	Y	L	K	D	K	E	V	Q	L	M	I	T	S	L	P	M	M	N	E	V	I
Template Known Secondary structure		T	T									T	T	T		S																				T	T						S	S	G	G	G	G		S	S															T						T	T	S	T	T					T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	W	P	H	I	N	G	V	F	Y	S	M	E	D	Q	E	R	V	V	N	G	L	Q	G	V	L	R	G	E	C	Y	F	T	Q	K	L	A	S	Y	L	I	T	H	S	G	N	Y	R	Y	N	S	T	E	S	A	L	L	T	H	R	E	K	E	I	L	N	K	L	R	I	G	A	S	N	N	E	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	P	L	L	D	K	F	M	K	D	L	I	I	Q	I	L	A	M	V	S	E	Q	E	R	N	E	S	K	Q	A	Q	G	I	Q	V	A	K	E	K	G	V	Y	K	G	R	P	L	L	Y	S	P	N	A	K	D	P	Q	K	R	V	I	Y	H	R	V	V	E	M	L	E	E	G	Q	A	I	S	K	I	A
Template Known Secondary structure		T																							T	T	T	T				T	T	T	T	S	S	S	S	S	S	S				S				S	S	S	T	T		S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	F	I	S	E	N	T	V	K	T	H	L	Y	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	V	N	I	T	R	Q	T	V	Y	R	I	K	H	D
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions