Job Description P52106 Confidence 99.98% Date Thu Jan 5 12:05:21 GMT 2012 Rank 3 Aligned Residues 193 % Identity 24% Template c1rnlA_ PDB info PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																												.	.																			.	.
Query SS confidence																												.	.																			.	.
Query Sequence		H	G	H	T	L	L	L	I	T	K	S	S	L	Q	A	T	A	L	L	Q	H	L	K	Q	S	L	.	.	A	I	T	G	K	L	H	N	I	Q	R	S	L	D	D	I	S	S	.	.	G	S	I	I	L	L	D	M	M	E	A	D	K	K	L	I	H	Y	W	Q	D	T	L	S	R	K	N	N	N	I	K	I
Query Conservation																												.	.																			.	.
Alig confidence																												.	.																			.	.																							.
Template Conservation																																																																								.
Template Sequence		E	P	A	T	I	L	L	I	D	D	H	P	M	L	R	T	G	V	K	Q	L	I	S	M	A	P	D	I	T	V	V	G	E	A	S	N	G	E	Q	G	I	E	L	A	E	S	L	D	P	D	L	I	L	L	D	L	N	M	P	G	M	N	G	L	E	T	L	D	K	L	.	R	E	K	S	L	S	G	R	I
Template Known Secondary structure											S														T		T	T								S	S														S						T	T		G	G	G										.	T	T	S				S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	N	T	P	E	D	Y	P	Y	R	D	I	E	N	W	P	H	I	N	G	V	F	Y	S	M	E	D	Q	E	R	V	V	N	G	L	Q	G	V	L	R	G	E	C	Y	F	T	Q	K	L	A	S	Y	L	I	T	H	S	G	N	Y	R	Y	N	S	T	E	S	A	L	L	T	H	R	E	K	E	I	L
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	F	S	V	S	N	H	E	E	D	V	V	T	A	L	K	R	G	A	D	G	Y	L	L	K	D	M	E	P	E	D	L	L	K	A	L	H	Q	A	A	A	G	E	M	V	L	S	E	A	L	T	P	V	L	A	A	S	L	.	.	.	.	.	.	.	.	.	.	.	Q	L	T	P	R	E	R	D	I	L
Template Known Secondary structure						S		S											T	T		S					T	T	S															S						T	T	T									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.												.	.	.	.	.	.	.	150	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	L	R	I	G	A	S	N	N	E	I	A	R	S	L	F	I	S	E	N	T	V	K	T	H	L	Y	N	L	F	K	K	I	A	V	K	N	R	T	Q	A	V	S	W	A	N	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	I	A	Q	G	L	P	N	K	M	I	A	R	R	L	D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K	L	K	S	R	V	E	A	A	V	W	V	H	Q	E
Template Known Secondary structure						T	T											T																	T	T			S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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