Job Description P25531 Confidence 37.15% Date Thu Jan 5 11:42:00 GMT 2012 Rank 89 Aligned Residues 65 % Identity 14% Template c3kntC_ PDB info PDB header:hydrolase, lyase/dna Chain: C: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: crystal structure of methanocaldococcus jannaschii 8-2 oxoguanine glycosylase/lyase in complex with 15mer dna3 containing 8-oxoguanine Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																				.	.	.	.	.																																		.	.	.	.	.
Query SS confidence																				.	.	.	.	.																																		.	.	.	.	.
Query Sequence		L	K	F	G	I	S	A	L	T	D	V	E	L	L	A	L	F	L	.	.	.	.	.	R	T	G	T	R	G	K	D	V	L	T	L	A	K	E	M	L	E	N	F	G	S	L	Y	G	L	L	T	S	E	Y	E	Q	.	.	.	.	.	F	S	G	V	H	G	I	G	V	A	K	F	A	Q	L	K	G
Query Conservation																				.	.	.	.	.																																		.	.	.	.	.
Alig confidence																				.	.	.	.	.																					.	.	.											.	.	.	.	.
Template Conservation																																													.	.	.
Template Sequence		I	G	D	G	F	L	T	L	P	R	E	E	L	E	E	K	L	K	N	L	G	H	R	F	Y	R	K	R	A	E	Y	I	V	L	A	R	R	F	K	N	I	K	D	.	.	.	I	V	E	S	F	E	N	E	K	V	A	R	E	F	L	V	R	N	I	K	G	I	G	Y	Q	E	A	S	H	F	L	R
Template Known Secondary structure			T	T					S												T	T		T	T											G	G	G	G						.	.	.					S	S	S												S	T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions