 |
Job Description | P25531 | Confidence | 97.70% | Date | Thu Jan 5 11:42:00 GMT 2012 |
Rank | 6 | Aligned Residues | 62 |
% Identity | 32% | Template | c2bhnD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:xpf endonuclease; |
PDBTitle: xpf from aeropyrum pernix
|
Resolution | 3.2 Å |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | V | E | L | L | A | L | F | L | R | T | G | T | R | G | K | D | V | L | T | L | A | K | E | M | L | E | N | F | G | S | L | Y | G | L | L | T | S | E | Y | E | Q | F | S | G | V | H | G | I | G | V | A | K | F | A | Q | L | K | G | I | A | E |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   | . |
|   |   |
|
|   |   |
|   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
S | D | V | R | E | W | Q | L | Y | I | L | Q | S | F | P | G | I | G | R | R | T | . |
A | E | R | I | L | E | R | F | G | S | L | E | R | F | F | T | A | S | K | A | E | I | S | K | V | E | G | I | G | E | K | R | A | E | E | I | K | K | I | L | M |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  |  |  | T | S | S | S |
|
|  |  |  | . |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
|
|  |  |  |  |  | T | S | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|