Job Description P76035 Confidence 28.61% Date Thu Jan 5 12:17:35 GMT 2012 Rank 33 Aligned Residues 48 % Identity 13% Template c3mhvC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of vps4 and vta1 Resolution 3.10 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	P	G	P	D	S	T	R	E	S	N	H	R	L	A	Q	I	T	Q	Y	A	R	Q	L	A	S	S	P	S	I	I	D	N	R	S	R	Q	H	L	N	D	V	G	L	T	A	W	D	C	V	I	I	S	Q
Query Conservation
Alig confidence									.	.	.	.	.	.																														.
Template Conservation									.	.	.	.	.	.																														.
Template Sequence		G	S	P	D	L	A	A	.	.	.	.	.	.	R	T	T	M	F	E	I	N	V	G	D	T	P	C	V	L	T	K	E	D	Y	R	T	L	G	A	M	T	E	.	G	Y	S	G	S	D	I	A	V	V	V	K
Template Known Secondary structure						S	S		.	.	.	.	.	.										T	T	S	S															T	T	.	T
Template Predicted Secondary structure									.	.	.	.	.	.																														.
Template SS confidence
		297	.	.	300	.	.	.							.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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