Return to main results Retrieve Phyre Job Id

Job DescriptionP76035
Confidence41.43%DateThu Jan 5 12:17:35 GMT 2012
Rank22Aligned Residues45
% Identity16%Templatec3iwfA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcription regulator rpir family; PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.. .......160.........170...
Predicted Secondary structure 



.



Query SS confidence 























.




















Query Sequence  TQYARQLASSPSIIDNRSRQHLND. VGLTAWDCVIISQIIGFIGFQ
Query Conservation        
   
          
  . 
 
  


 




 

 

Alig confidence 























.




















Template Conservation    

 


         

 


    

 


 

 




 

 
Template Sequence  KKIAQFILNYPHKVVNXTSQEIANQLETSSTSIIRLSKKVTPGGFN
Template Known Secondary structure 
TT

TS
STT
Template Predicted Secondary structure 









Template SS confidence 













































   20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions