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Job DescriptionP52048
Confidence100.00%DateThu Jan 5 12:05:00 GMT 2012
Rank54Aligned Residues308
% Identity20%Templatec1yb5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human zeta-crystallin with bound nadp
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TKVAAIY. . . GKRDVRL. RVFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLENHPVITGHECAGVIVEVG
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Template Sequence  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY. . . . . . SRKPLLPYTPGSDVAGVIEAVG
Template Known Secondary structure  SS
SSGGG




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Query Sequence  KNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHAN
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Template Sequence  DNASA. FKKGDRVFTSSTIS. . . . . . . . . . . . . . GGYAEYALAADHT. . . . VYKLPEKLDFKQGA. . . . . . . . . . AIGIP
Template Known Secondary structure  TT
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SSBSGGG....

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Query Sequence  YHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIELVYVN
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Template Sequence  YFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG. . . LKILGTAGTEEGQKIVLQNGAHEVFNH. . . . . . . . .
Template Known Secondary structure  TTS


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Query Sequence  TKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGS
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Template Sequence  . . REVNYIDKIKKYVGE. KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT. . . . IEINPRDTMAKESSIIGVTLFS
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Query Sequence  . . . . . . TDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIP. . GGKKLI
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Template Sequence  STKEEFQQYAAALQAGMEIGWLKP. . VIGSQYPLEKVAEAHENIIHGSGATGKMIL
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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