54 c1yb5A_ Probab=100.00  E-value=1.7e-35  Score=246.83  Aligned_columns=308  Identities=20%

Q ss_pred             EEEEEEE---CCCEEEE-EEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEEEEECC
Q ss_conf             5999997---8961699-98507877986489999998644767988819865555665555797022544059999738
Q batch____         3 TKVAAIY---GKRDVRL-RVFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLENHPVITGHECAGVIVEVG   78 (425)
Q Consensus         3 ~ka~~~~---G~~~l~l-~e~p~P~p~~~eVLVkV~a~giC~sD~~~~~~g~~~~~~~~~~~~~P~vlGHE~aG~VvevG   78 (425)
                      |||++++   ++++|++ +|+|+|+|+++||||||.++|||+||+|++++..      ....++|+++|||++|+|+++|
T Consensus         3 MkA~v~~~~g~~~~l~~~~d~p~P~p~~~eVlVkV~a~gic~~D~~~~~G~~------~~~~~~p~v~g~~~~g~v~~~g   76 (324)
T c1yb5A_           3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY------SRKPLLPYTPGSDVAGVIEAVG   76 (324)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCS------SCCCCSSBCCCSCEEEEEEEEC
T ss_pred             CEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCC------CCCCCCCEEEEEEEEEEEEECC
T ss_conf             2899982468810289997306887798638999999974899999885988------8877796572001126886326


Q ss_pred             CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHH
Q ss_conf             89865610053699945877787723478987338874257634543244203648999977720134058998876432
Q batch____        79 KNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHAN  158 (425)
Q Consensus        79 ~~V~~~~~~GdrV~v~~~~~~g~~~~c~~g~~~~Gg~aey~~vp~~~~~~~~~~~p~~~s~~~aal~epl~~~~~a~~~~  158 (425)
                      +.+.. +..+|++...+...              +.+..+.......    ....+...++..++          .....
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~----~~~~~~~~~~~~~a----------~~~~~  127 (324)
T c1yb5A_          77 DNASA-FKKGDRVFTSSTIS--------------GGYAEYALAADHT----VYKLPEKLDFKQGA----------AIGIP  127 (324)
T ss_dssp             TTCTT-CCTTCEEEESCCSS--------------CSSBSEEEEEGGG----EEECCTTSCHHHHT----------TTHHH
T ss_pred             CCCCE-EECCCCEEECCCCC--------------HHHHHHHCCHHHH----EEECCCCCCHHHHC----------CCCCC
T ss_conf             64411-21362022035421--------------0244430001111----11113588622200----------00123


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCHHHCCCCCCCCEEEC
Q ss_conf             45667888886077789848999748788999999999813899689998189899999997276021012345420104
Q batch____       159 YHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIELVYVN  238 (425)
Q Consensus       159 ~~~~~~~~~~~~~~~~g~~vviigG~G~iGl~aiq~A~~~g~~~~~Vi~~d~~~~rl~~A~~lga~~~~~~~g~~~~~i~  238 (425)
                      ..+................+++.++.+.+|+++.+.++..+   ..++.+.....+...++..+.......         
T Consensus       128 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  195 (324)
T c1yb5A_         128 YFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTEEGQKIVLQNGAHEVFNH---------  195 (324)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTTCSEEEET---------
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHEEEEHHCCCC---CEEEEEEECCCHHHHHHHCCCCEEEEC---------
T ss_conf             32222111222234432056650344100110000010157---311245310225888872277347633---------


Q ss_pred             CCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCC
Q ss_conf             67767889999865089970299986898899999999715788899996115887511048999853781799802789
Q batch____       239 TKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGS  318 (425)
Q Consensus       239 ~~~~~d~~~~v~~~t~g~g~D~v~d~~g~~~~~~~a~~~l~~gG~iv~~g~~~~~~~~~~~~~~~i~~~~~~i~Gs~~~~  318 (425)
                        ..+...+.+.+.+.+ ..+.+++..............++.+|+++.++....    ...+...+..+++++.|++.++
T Consensus       196 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~----~~~~~~~~~~~~~~~~g~~~~~  268 (324)
T c1yb5A_         196 --REVNYIDKIKKYVGE-KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT----IEINPRDTMAKESSIIGVTLFS  268 (324)
T ss_dssp             --TSTTHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC----CCCCTHHHHTTTCEEEECCGGG
T ss_pred             --CCCCHHHHHHHHHCC-CCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCC----CCCCHHHHHHCCCEEEEEEEEC
T ss_conf             --776688999987324-784167633573568989863169838999825887----5557478873662799998104


Q ss_pred             ------HHHHHHHHHHHHCCCCCCHHEEEEEECHHHHHHHHHHHHHCC--CCEEEE
Q ss_conf             ------899999999998189984110676505899999999876089--976998
Q batch____       319 ------TDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIP--GGKKLI  366 (425)
Q Consensus       319 ------~~d~~~~~~li~~G~i~p~~~It~~~gLd~~~ea~~~~~~~~--~GKvvI  366 (425)
                            .++++++++|+++|+|+|  +|||+|+||+++|||+.|.+++  .||+||
T Consensus       269 ~~~~~~~~~~~~l~~l~~~g~i~p--~i~~~~~l~~~~~A~~~l~~g~~~~GKvVi  322 (324)
T c1yb5A_         269 STKEEFQQYAAALQAGMEIGWLKP--VIGSQYPLEKVAEAHENIIHGSGATGKMIL  322 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCCCC--CEEEEEEGGGHHHHHHHHHHSSCCSSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCC--CCEEEEEHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             886889999999999998389631--522584189999999999818997334999