 |
Job Description | P75742 | Confidence | 3.03% | Date | Thu Jan 5 12:13:40 GMT 2012 |
Rank | 42 | Aligned Residues | 26 |
% Identity | 12% | Template | c1h2uB_ |
PDB info |
PDB header:nuclear protein | Chain: B: PDB Molecule:80 kda nuclear cap binding protein; |
PDBTitle: structure of the human nuclear cap-binding-complex (cbc) in2 complex with a cap analogue m7gpppg
|
Resolution | 2.4 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | K | H | A | S | Q | P | R | A | I | Y | Y | V | V | A | L | Q | I | W | E | Y | F | S | F | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |
|   |   |
|
|
|
|   |
Template Sequence |   |
L | S | Q | D | P | E | S | P | K | P | K | F | V | R | E | V | L | E | K | C | M | R | L | S | Y | H |
Template Known Secondary structure |   |
G | G | S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
437 | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|