Job Description P45579 Confidence 24.58% Date Thu Jan 5 12:03:26 GMT 2012 Rank 204 Aligned Residues 87 % Identity 11% Template d8abpa_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.49

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		37	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.	.																																																		.
Query SS confidence											.	.																																																		.
Query Sequence		A	V	W	I	Y	G	K	R	A	.	.	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	E	S	G	D	D	R	S	V	V	I	G	V	G	.	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	G	L	P	F
Query Conservation											.	.																																																		.
Alig confidence											.	.																																																		.
Template Conservation
Template Sequence		G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	A	V	P	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A	K	A	R	G	Y	D	M	K	V
Template Known Secondary structure						S		T	T	S																		T										S														T	T									S		G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	P	T	I	A	A	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	V	D	D	Q	F	V	N	A
Template Known Secondary structure					S	S			B		T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions