Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 7 Aligned Residues 334 % Identity 18% Template d1vlja_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Iron-containing alcohol dehydrogenase Resolution 1.78

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		H	N	P	I	R	V	V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	.	.	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A
Query Conservation																																																.	.
Alig confidence																																																.	.
Template Conservation
Template Sequence		H	M	E	N	F	V	F	H	N	P	T	K	I	V	F	G	R	G	T	I	P	K	I	G	E	E	I	K	N	A	G	I	R	K	V	L	F	L	Y	G	G	G	S	I	K	K	N	G	V	Y	D	Q	V	V	D	S	L	K	K	H	G	I	E	W	V	E	V	S	G	V	K	P	N	P	V	L	S	K	V	H
Template Known Secondary structure																	S	T	T		G	G	G								T	T										S	S					S	S												T	T											S	S		B
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	E	S	G	D	D	R	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	L	P	F	V	A	V	P	T	I	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q
Query Conservation			.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	V	E	V	A	K	K	E	K	V	E	A	V	L	G	V	G	G	G	S	V	V	D	S	A	K	A	V	A	A	G	A	L	Y	E	G	D	I	W	D	A	F	I	G	K	Y	Q	I	E	K	A	L	P	I	F	D	V	L	T	I	S	A	T	G	T	E	M	N	G	N	A	V	I	T	N	E	K	T	K
Template Known Secondary structure										T	T		S							S														T	T		S	S		G	G	G	G	G	G	T	S															S		S	S		G	G	G	S	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		139	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	L	.	H	Y	E	I	F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q	Q	Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	V	L	A	P	Q	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L
Query Conservation				.
Alig confidence				.																																																														.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		E	K	Y	G	V	S	S	K	A	L	Y	P	K	V	S	I	I	D	P	S	V	Q	F	T	L	P	K	E	Q	T	V	Y	G	A	V	D	A	I	S	H	I	L	E	Y	Y	F	D	G	S	S	P	E	I	S	N	E	I	A	E	G	T	I	R	T	.	.	.	.	.	.	.	I	M	K	M	T	E	R	L	I
Template Known Secondary structure									G	G	G	S		S						G	G	G	G	G	G	S																					T	S	S																	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																																									.	.	.	.	.
Query SS confidence																																	.	.	.	.																																									.	.	.	.	.
Query Sequence		S	D	Q	Q	N	Q	Q	L	T	Q	S	F	C	D	V	V	D	A	I	I	A	G	G	G	M	V	G	G	L	G	D	.	.	.	.	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	.	.	.	.	.
Query Conservation																																	.	.	.	.																																									.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																	.	.	.	.																		.	.	.																					.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.																																						.	.	.
Template Sequence		E	K	P	D	D	Y	E	.	.	.	.	.	.	.	.	A	R	A	N	L	A	W	S	A	T	I	A	L	N	G	T	M	A	V	G	R	R	G	G	E	W	A	C	H	R	I	E	H	S	L	S	A	.	.	.	L	Y	D	I	A	H	G	A	G	L	A	I	V	F	P	A	W	M	K	Y	V	Y	R	K	N
Template Known Secondary structure				T	T				.	.	.	.	.	.	.	.													T	S	S	T	T	T	T	T	S		S															.	.	.																						G	G	G	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
		233	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
																					289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.								.	.	.	.	.	340	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Q	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N	N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	.	.	.	.	.	.	.	V	E	S	I	H	Y	L	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																.	.	.	.	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		P	A	Q	F	E	R	F	A	K	K	I	F	G	F	E	G	E	G	E	E	L	I	L	K	G	I	E	A	F	K	N	W	L	K	K	V	G	A	P	V	S	L	K	D	A	G	I	.	.	.	P	E	E	D	I	D	K	I	V	D	N	V	M	L	L	V	E	K	N	L	K	P	K	G	A	S	L	G	R	I
Template Known Secondary structure																																					T	T				S	T	G	G	G	T		.	.	.		G	G	G															T	T	G	G	G	T			S		S	S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	T	P	D	T	L	R	A	A	F	K	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	L	E	R	E	D	V	R	E	I	L	K	L	A
Template Known Secondary structure		S														T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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