 |
Job Description | P45579 | Confidence | 83.51% | Date | Thu Jan 5 12:03:26 GMT 2012 |
Rank | 56 | Aligned Residues | 73 |
% Identity | 15% | Template | d1q6za1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 1.00 |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . | . | 70 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | N | H | L | H | D | F | F | T | D | E | Q | L | S | R | A | V | W | I | Y | G | K | R | A | I | A | A | . |
A | Q | T | K | L | P | P | A | F | G | L | P | G | A | K | H | I | L | . |
. |
F | R | G | H | C | S | E | S | D | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | Q | L | A | A | E | S | G | D | D |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|   |   | . | . |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
D | L | D | I | L | V | K | A | L | N | S | . |
. |
A | S | N | P | A | I | V | L | G | P | D | V | D | A | A | N | A | N | A | D | C | V | M | L | A | E | R | L | K | A | P | V | W | V | A | P | S | A | P | R | C | P | F | P | T | R | H | P | C | F | R | G | L | M | P | A | G | I | A | A | I | S | Q | L | L | E | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |
| S | S |
|  |  |  |  |
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| S | S |
| S | S |
|
| S |
| T | T | S | T | T |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | |
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
  |   |
87 | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | V | V | I | G | V | G | G |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
H | D | V | V | L | V | I | G | A |
Template Known Secondary structure |   |
| S |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
267 | . | . | 270 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|