Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 13 Aligned Residues 322 % Identity 20% Template d1o2da_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Iron-containing alcohol dehydrogenase Resolution 1.30

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																													.	.																																		.	.
Query SS confidence																																													.	.																																		.	.
Query Sequence		I	R	V	V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	.	.	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	.	.
Query Conservation																																													.	.																																		.	.
Alig confidence																														.															.	.																																		.	.
Template Conservation																														.
Template Sequence		V	W	E	F	Y	X	P	T	D	V	F	F	G	E	K	I	L	E	K	R	G	N	I	I	D	L	L	G	.	K	R	A	L	V	V	T	G	K	S	S	S	K	K	N	G	S	L	D	D	L	K	K	L	L	D	E	T	E	I	S	Y	E	I	F	D	E	V	E	E	N	P	S	F	D	N	V	X	K	A	V
Template Known Secondary structure														S	T	T						G	G	G	G	G	G	T		.	S								S	S	G	G	G	T	S	S												T	T											S	S		B
Template Predicted Secondary structure																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
				82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	E	S	G	D	D	R	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	F	V	A	V	P	T	I	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q	A	L	H
Query Conservation		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	Y	R	N	D	S	F	D	F	V	V	G	L	G	G	G	S	P	X	D	F	A	K	A	V	A	V	L	L	K	E	K	D	L	S	V	E	D	L	Y	D	R	E	K	V	K	H	W	L	P	V	V	E	I	P	T	T	A	G	T	G	S	E	V	T	P	Y	S	I	L	T	D	P	E	G	N	K	R	G
Template Known Secondary structure					T	T	S			S							S														T	T	S	T	T			S	G	G	G	G		G	G	G													S	S				G	G	G									T	T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q	Q	Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	V	L	A	P	Q	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q
Query Conservation
Alig confidence					.	.																																										.	.	.
Template Conservation					.	.																																										.	.	.
Template Sequence		C	T	L	.	.	X	F	P	V	Y	A	F	L	D	P	R	Y	T	Y	S	X	S	D	E	L	T	L	S	T	G	V	D	A	L	S	H	A	V	E	G	Y	L	S	R	K	S	.	.	.	T	P	P	S	D	A	L	A	I	E	A	X	K	I	I	H	R	N	L	P	K	A	I	E	G	N	R	E	A	R	K
Template Known Secondary structure					.	.				S						G	G	G	G	G	G																							S	T	T		.	.	.																								T	T
Template Predicted Secondary structure					.	.																																										.	.	.
Template SS confidence
		160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	Q	L	T	Q	S	F	C	D	V	V	D	A	I	I	A	G	G	G	M	V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	F	V	A	S	C	L	A	G	X	V	I	A	Q	T	G	T	T	L	A	H	A	L	G	Y	P	L	T	T	.	.	.	E	K	G	I	K	H	G	K	A	T	G	X	V	L	P	F	V	X	E	V	X	K	E	E	I	P	E	K	V	D	T	V	N
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																						T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		235															.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N	N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	L	T	P	D	T	L	R	A	A	F	K	K	V
Query Conservation
Alig confidence																						.	.	.			.	.	.																		.
Template Conservation																						.	.	.			.	.	.																		.
Template Sequence		H	I	F	G	G	S	L	L	K	F	L	K	E	L	G	L	Y	E	K	V	.	.	.	A	V	.	.	.	S	S	E	E	L	E	K	W	V	E	K	G	S	R	A	K	H	.	L	K	N	T	P	G	T	F	T	P	E	K	I	R	N	I	Y	R	E	A
Template Known Secondary structure				T	T	T									T	T						.	.	.			.	.	.													T	T		G	G	.	G	G	G	S	S	S
Template Predicted Secondary structure																						.	.	.			.	.	.																		.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions