Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 3 Aligned Residues 344 % Identity 28% Template c3uhjE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:probable glycerol dehydrogenase; PDBTitle: crystal structure of a probable glycerol dehydrogenase from2 sinorhizobium meliloti 1021 Resolution 2.34 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		R	V	V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	.	E	S	G	D
Query Conservation																																																																													.
Alig confidence																													.																								.	.	.	.	.																				.
Template Conservation																													.																								.	.	.	.	.
Template Sequence		R	A	F	G	G	P	N	K	Y	I	Q	R	A	G	E	I	D	K	L	A	A	Y	L	A	P	L	G	.	K	R	A	L	V	L	I	D	R	V	L	F	D	A	L	S	E	R	I	S	L	D	I	.	.	.	.	.	R	F	E	R	F	G	G	E	C	C	T	S	E	I	E	R	V	R	K	V	A	I	E	H
Template Known Secondary structure								S						T	T	G	G	G	G						T	T	T		.	S								G	G	G													.	.	.	.	.							S
Template Predicted Secondary structure																													.																								.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	G	L	P	F	V	A	V	P	T	I	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q	A	L	H	Y	E	I	F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	D	I	L	V	G	V	G	G	G	K	T	A	D	T	A	K	I	V	A	I	D	T	G	A	R	I	V	I	A	P	T	I	A	S	T	D	A	P	C	S	A	I	A	V	R	Y	T	E	H	G	V	Y	E	E	A	L	R	L	P	R	N	P	D	A	V	V	V	D	S	A	L	V	A	A	A	P	A	R
Template Known Secondary structure		T		S						S	S															T								S	S				S	T	T	T		S							T	T	S									S	S			S											T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	V	L	A	P	Q	.	.	.	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q	N	Q	Q	L	T	Q	S	F	C	D	V	V	D	A	I	I	A	G	G	G	M
Query Conservation																								.	.	.
Alig confidence																								.	.	.																																														.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		F	L	V	A	G	I	G	D	A	L	S	T	W	F	E	A	R	S	N	I	E	S	R	T	D	N	A	G	G	F	P	A	T	E	A	G	X	A	I	A	R	H	C	Q	D	V	L	T	R	D	A	V	K	A	K	I	A	V	E	A	G	L	L	T	P	A	V	E	N	I	.	.	.	.	I	E	A	N	T	L
Template Known Secondary structure											T													T																																					T	T										.	.	.	.					T
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	.	Q	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N	N	Q
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		L	S	G	L	G	F	E	N	C	G	C	S	A	A	H	G	I	H	D	G	L	T	V	L	E	E	V	H	G	Y	F	H	G	E	K	V	A	F	G	T	L	C	L	L	X	L	E	N	R	D	R	A	E	I	E	A	X	I	R	F	C	R	S	V	G	L	P	T	K	L	A	D	L	G	I	V	D	D	V	P
Template Known Secondary structure																							T	T	S	G	G	G	T	T	S																	T	T															T	T	T				S	G	G	G	G	T			S	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	L	T	P	D	T	L	R	A	A	F	K	K	V	E	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	I	G	R	V	A	E	A	A	C	R	P	G	N	I	I	Y	A	T	P	V	T	I	T	V	P	A	V	R	D	A	I	L	A	L	D	A	F
Template Known Secondary structure												T	S	T	T		G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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