Job Description P45579 Confidence 23.12% Date Thu Jan 5 12:03:26 GMT 2012 Rank 223 Aligned Residues 91 % Identity 12% Template c3q41B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate [nmda] receptor subunit zeta-1; PDBTitle: crystal structure of the glun1 n-terminal domain (ntd) Resolution 3.40 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																														.																				.	.
Query SS confidence																														.																				.	.
Query Sequence		S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	.	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	.	.	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	E	S	G	D	D	R	S	V	V	I	G	V	G	G	G	A
Query Conservation																														.																				.	.
Alig confidence																														.																				.	.																												.	.
Template Conservation																																																																															.	.
Template Sequence		Q	S	S	V	W	F	E	M	M	R	V	Y	N	W	N	H	I	I	L	L	V	S	D	D	H	E	G	R	A	A	Q	K	R	L	E	T	L	L	E	E	R	E	S	K	A	E	K	V	L	Q	F	D	P	G	T	K	N	V	T	A	L	L	M	E	A	R	E	L	E	A	R	V	I	I	L	S	A	.	.	S
Template Known Secondary structure													B											S	S															T	T	S	S											T	T		S											T	S	S									.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	T	A	K	A	L	A	R	R	L	G	L	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	D	A	A	T	V	Y	R	A	A	A	M	L	N	M
Template Known Secondary structure														T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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