Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 5 Aligned Residues 327 % Identity 16% Template c3ox4D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.
Predicted Secondary structure																																										.																																		.	.	.	.
Query SS confidence																																										.																																		.	.	.	.
Query Sequence		V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	.	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	.	.	.	.	E	S
Query Conservation																																										.																																		.	.	.	.
Alig confidence																																										.																																		.	.	.	.
Template Conservation
Template Sequence		F	Y	I	P	F	V	N	E	M	G	E	G	S	L	E	K	A	I	K	D	L	N	G	S	G	F	K	N	A	L	I	V	S	D	A	F	M	N	K	S	G	V	V	K	Q	V	A	D	L	L	K	A	Q	G	I	N	S	A	V	Y	D	G	V	M	P	N	P	T	V	T	A	V	L	E	G	L	K	I	L	K
Template Known Secondary structure						S					S	T	T								T	T	T	T	S																T	T											T	T	T											S	S		B
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		G	D	D	R	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	L	P	F	V	A	V	P	T	I	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	.	G	Q	A	L	H	Y	E	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		D	N	N	S	D	F	V	I	S	L	G	G	G	S	P	H	D	C	A	K	A	I	A	L	V	A	T	N	G	G	E	V	K	D	Y	E	G	I	D	K	S	K	K	P	A	L	P	L	M	S	I	N	T	T	A	G	T	A	S	E	M	T	R	F	C	I	I	T	D	E	V	R	H	V	K	M	A	I	V	D
Template Known Secondary structure			T	T									S																		S		S	G	G	G				S			S	S			S								S	S	S			T	T	T		S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q	Q	Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	V	L	A	P	Q	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q	N	Q	Q
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		R	H	V	T	P	M	V	S	V	N	D	P	L	L	M	V	G	M	P	K	G	L	T	A	A	T	G	M	D	A	L	T	H	A	F	E	A	Y	S	S	T	A	A	T	P	I	T	D	A	C	A	L	K	A	A	S	M	.	.	.	.	.	.	.	I	A	K	N	L	K	T	A	C	D	N	G	K	D	M	P
Template Known Secondary structure		G	G	G	S		S						G	G	G	T	T	T																							S	T	T																.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	Q	S	F	C	D	V	V	D	A	I	I	A	G	G	G	M	V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																		.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	R	E	A	M	A	Y	A	Q	F	L	A	G	M	A	F	N	N	A	S	L	G	Y	V	H	A	M	A	H	Q	L	G	G	.	.	.	Y	Y	N	L	P	H	G	V	C	N	A	V	L	L	P	H	V	L	A	Y	N	A	S	V	V	A	G	R	L	K	D	V	G	V	A	M
Template Known Secondary structure		.	.	.	.	.	.	.	.																																		.	.	.																																				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
										239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
														291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N	N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	L	T	P	D	T	L	R	A	A	F	K	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.																						.
Template Conservation																																								.	.	.																						.
Template Sequence		G	L	D	I	A	N	L	G	D	K	E	G	A	E	A	T	I	Q	A	V	R	D	L	A	A	S	I	G	I	P	A	N	L	T	E	L	G	A	.	.	.	K	K	E	D	V	P	L	L	A	D	H	A	L	K	D	A	C	A	L	T	N	.	P	R	Q	G	D	Q	K	E	V	E	E	L	F	L	S	A
Template Known Secondary structure		T		S		S	S	S																				T	T			S	S					T		.	.	.		G	G	G									T	T	S	G	G	G	G	G		.	S	S														T
Template Predicted Secondary structure																																								.	.	.																						.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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