Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 16 Aligned Residues 330 % Identity 14% Template c3okfA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase2 (arob) from vibrio cholerae Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		M	P	H	N	P	I	R	V	V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	.	.	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q
Query Conservation																																																																		.	.
Alig confidence																																			.																															.	.
Template Conservation																																			.
Template Sequence		M	E	R	I	T	V	N	L	G	E	R	S	Y	P	I	S	I	G	A	G	L	F	A	N	P	A	L	L	S	L	S	A	K	.	Q	K	V	V	I	V	T	N	H	T	V	A	P	L	Y	A	P	A	I	I	S	L	L	D	H	I	G	C	Q	H	A	L	L	E	L	P	D	G	E	Q	Y	K	T	L	E	T
Template Known Secondary structure										G	G	G								T	T	G	G	G		G	G	G	G				T	T	.									T	T	T																T										S	S	G	G	G		B
Template Predicted Secondary structure																																			.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.					.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.							.	.	.																				.	.														.	.
Query SS confidence					.	.	.	.							.	.	.																				.	.														.	.
Query Sequence		L	A	A	.	.	.	.	E	S	G	D	D	R	.	.	.	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	.	.	R	R	L	G	L	P	F	V	A	V	P	T	I	.	.	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q	A	L	H	Y	E	I	F	D	D
Query Conservation					.	.	.	.							.	.	.																				.	.														.	.
Alig confidence					.	.	.	.							.	.	.																				.	.														.	.																												.
Template Conservation																																																																																	.
Template Sequence		F	N	T	V	M	S	F	L	L	E	H	N	Y	S	R	D	V	V	V	I	A	L	G	G	G	V	I	G	D	L	V	G	F	A	A	A	C	Y	Q	R	G	V	D	F	I	Q	I	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	.
Template Known Secondary structure												T	T			T	T								S														G	G	G										S							T	S	S	S								T	T											.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q	Q	Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	V	L	A	P	Q	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q	N	Q	Q	L	T	Q
Query Conservation
Alig confidence		.																																								.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation		.																																								.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		.	P	K	A	V	V	I	D	T	D	C	L	T	T	L	P	A	R	E	F	A	A	G	M	A	E	V	I	K	Y	G	I	I	Y	D	S	A	F	F	D	.	.	.	.	.	.	.	.	.	W	L	E	A	Q	M	E	A	L	Y	A	L	D	E	Q	A	L	T	Y	A	I	A	R	C	C	Q	.	.	.	.	.
Template Known Secondary structure		.		S						G	G	G	G	G	G	S																			T							.	.	.	.	.	.	.	.	.											T	T															.	.	.	.	.
Template Predicted Secondary structure		.																																								.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
			164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.										.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		S	F	C	D	V	V	D	A	I	I	A	G	G	G	M	V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	Q	.	.	.	.	.	D	D	V	L	A	Q	L	T	G	A	Y
Query Conservation																																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	K	A	E	V	V	A	Q	D	E	K	G	I	R	A	L	L	N	L	G	H	T	F	G	H	A	I	E	A	H	M	G	Y	G	N	W	L	H	G	E	A	V	S	A	G	T	V	M	A	A	K	T	A	Q	L	Q	G	L	I	D	A	S	Q	F	E	R	I	L	A	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.													G	G	G	G	G	G	T	T													T	T	T	S																				T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.												.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N	N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	.	.	.	.	.	.	.	.	.	.	.	L	T	P	D	T	L	R	A	A	F	K	K	V	E	S	F
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.			.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.			.	.	.
Template Sequence		K	K	A	H	L	P	V	R	T	P	E	.	N	M	.	.	.	T	F	A	D	F	M	Q	H	M	M	R	D	K	K	V	L	A	G	E	L	R	L	V	L	P	T	S	I	G	T	S	A	V	V	K	G	V	P	E	A	V	I	A	Q	A	I	E	Y	C	R	T	V
Template Known Secondary structure				T	T				S			T	.	T		.	.	.										T	G	G	G	T			T	T										T	T																				T	T
Template Predicted Secondary structure													.			.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.		.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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