Job Description P45579 Confidence 24.87% Date Thu Jan 5 12:03:26 GMT 2012 Rank 200 Aligned Residues 84 % Identity 18% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.
Predicted Secondary structure																							.	.	.																																																						.	.
Query SS confidence																							.	.	.																																																						.	.
Query Sequence		H	N	P	I	R	V	V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	.	.	.	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	.	.	Q
Query Conservation																							.	.	.																																																						.	.
Alig confidence													.	.	.	.							.	.	.											.																																											.	.
Template Conservation													.	.	.	.																				.
Template Sequence		K	P	Y	V	I	M	F	V	G	F	N	.	.	.	.	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	.	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D
Template Known Secondary structure		S										T	.	.	.	.	T	S	S															T	T	.										T	T															T	T							S	T	T
Template Predicted Secondary structure													.	.	.	.																				.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	A	E	S	G	D	D	R	S	V	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	Q	H	A	K	A	R	G	I	D	V	V	L
Template Known Secondary structure										T		S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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