Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 14 Aligned Residues 335 % Identity 14% Template c3ce9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase (np_348253.1) from2 clostridium acetobutylicum at 2.37 a resolution Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	.	.	H	C	S	E	S	D	V	Q	Q	L	A	A	E	S	G	D	D
Query Conservation																																																															.	.
Alig confidence																																																															.	.
Template Conservation
Template Sequence		I	A	I	P	L	I	L	E	V	G	N	N	K	I	Y	N	I	G	Q	I	I	K	K	G	N	F	K	R	V	S	L	Y	F	G	E	G	I	Y	E	L	F	G	E	T	I	E	K	S	I	K	S	S	N	I	E	I	E	A	V	E	T	V	K	N	I	D	F	D	E	I	G	T	N	A	F	K	I	P	A	E
Template Known Secondary structure						S						S	S		G	G	G						G	G	G	T		S								T	T															T	T	T													B									T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	G	L	P	F	V	A	V	P	T	I	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q	A	L	H	Y	E	I	F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q	Q	Y
Query Conservation
Alig confidence																																																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence		V	D	A	L	I	G	I	G	G	G	K	A	I	D	A	V	K	Y	X	A	F	L	R	K	L	P	F	I	S	V	P	T	S	T	S	N	D	G	F	S	S	P	V	A	S	L	L	I	N	G	K	R	T	S	V	P	A	.	.	.	K	T	P	D	G	I	V	V	D	I	D	V	I	K	G	S	P	E	K	F
Template Known Secondary structure										S															T								S			S	S	G	G	G	T	S	S							T	T								.	.	.				S											T	S
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	.	.	.	.	.	V	L	A	P	Q	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q	N	Q	Q	L	T	Q	S	F	C	D	V	V	D	A	I	I	A	G	G	G
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	S	G	I	G	D	L	V	S	N	I	T	A	L	Y	D	W	K	F	E	E	E	N	H	K	S	I	I	D	D	F	A	V	X	I	S	K	K	S	V	N	S	F	V	R	T	.	.	.	.	.	.	.	.	.	.	D	F	K	S	I	K	D	E	V	F	L	K	E	L	V	D	S	L	T	X	N	G	I
Template Known Secondary structure																									T	T	S																						.	.	.	.	.	.	.	.	.	.			S		T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	Q	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N	N	Q
Query Conservation
Alig confidence																													.																								.	.
Template Conservation																													.																								.	.
Template Sequence		A	X	E	I	A	G	N	S	S	P	A	S	G	A	E	H	L	I	S	H	A	L	D	K	F	L	P	.	N	P	Q	L	H	G	I	Q	V	G	V	A	T	Y	I	X	S	K	V	H	K	H	R	.	.	E	E	R	I	K	K	I	L	S	D	T	G	F	F	N	Y	V	K	G	L	N	X	K	K	S	D	F
Template Known Secondary structure							T	S	S	T	T	T		S														S	.	S																				T	S	S	.	.											T	T							T	T
Template Predicted Secondary structure																													.																								.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	L	T	P	D	T	L	R	A	A	F	K	K	V	E	S	F	K
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		K	R	A	I	S	E	A	H	L	I	K	P	A	R	.	.	Y	T	Y	L	H	V	E	K	N	C	E	T	A	K	E	I	V	D	T	D	E	I	L	R
Template Known Secondary structure												S	T	T	S	.	.			G	G	G	S
Template Predicted Secondary structure																.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions