Job Description P45579 Confidence 52.30% Date Thu Jan 5 12:03:26 GMT 2012 Rank 111 Aligned Residues 74 % Identity 9% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	E	S	G	D	D	R	S	V	V	I	G	.	.	.	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	G	L
Query Conservation																																																												.	.	.
Alig confidence															.	.	.																		.	.	.	.	.																					.	.	.
Template Conservation															.	.	.																		.	.	.	.	.
Template Sequence		K	K	I	L	V	V	D	D	E	K	P	I	A	.	.	.	D	I	L	E	F	N	L	R	K	E	G	Y	E	V	H	C	A	.	.	.	.	.	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M
Template Known Secondary structure									S						.	.	.											T							.	.	.	.	.		S														S						T	T		S	S	S															S
Template Predicted Secondary structure															.	.	.																		.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		112	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	V	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	I	M	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions