Return to main results Retrieve Phyre Job Id

Job DescriptionP45579
Confidence54.67%DateThu Jan 5 12:03:26 GMT 2012
Rank105Aligned Residues70
% Identity11%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70...... ...80.........90.
Predicted Secondary structure 














..





Query SS confidence 























































. .














Query Sequence  SFNHLHDFFTDEQLSRAVWIYGKRAIAAAQTKLPPAFGLPGAKHILFRGHCSESDV. . QQLAAESGDDRSVVI
Query Conservation      
   
      
 



           
   
           
      
..  
        
 

Alig confidence 












.









































..














Template Conservation 
 



      
. 

 

 


 
 

 


   
   


        

  
    
  
     



Template Sequence  TAAKLALYYKGKG. RRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLIL
Template Known Secondary structure  TT.



SS
T



TT

T
S
Template Predicted Secondary structure 

.




















Template SS confidence 








































































   114.....120...... ...130.........140.........150.........160.........170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions