Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 18 Aligned Residues 291 % Identity 15% Template c1xahA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of staphlyococcus aureus 3-dehydroquinate2 synthase (dhqs) in complex with zn2+ and nad+ Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	.	.	.	.	E	S	G	D	D
Query Conservation																																																																									.	.	.	.
Alig confidence																									.	.																			.	.	.	.	.	.																							.	.	.	.
Template Conservation																									.	.																			.	.	.	.	.	.
Template Sequence		N	N	Y	P	I	Y	V	E	H	G	A	I	K	Y	I	G	T	Y	L	N	Q	F	D	.	.	Q	S	F	L	L	I	D	E	Y	V	N	Q	Y	F	A	N	K	F	.	.	.	.	.	.	D	N	V	H	K	V	I	I	P	A	G	E	K	T	K	T	F	E	Q	Y	Q	E	T	L	E	Y	I	L	S	H	H
Template Known Secondary structure										T	T	G	G	G							T	T		S	.	.																			.	.	.	.	.	.										S	G	G	G	G		S													T	T
Template Predicted Secondary structure																									.	.																			.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure				.	.	.																						.	.											.
Query SS confidence				.	.	.																						.	.											.
Query Sequence		R	S	.	.	.	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	.	.	G	L	P	F	V	A	V	P	T	I	.	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q	A	L	H	Y	E	I	F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L
Query Conservation				.	.	.																						.	.											.
Alig confidence				.	.	.																						.	.											.																												.	.
Template Conservation																																																																				.	.
Template Sequence		V	T	R	N	T	A	I	I	A	V	G	G	G	A	T	G	D	F	A	G	F	V	A	A	T	L	L	R	G	V	H	F	I	Q	V	P	T	T	I	L	A	H	D	S	S	V	G	G	K	V	G	I	N	S	K	Q	G	K	N	L	I	G	A	F	Y	R	.	.	P	T	A	V	I	Y	D	L	D	F	L	K
Template Known Secondary structure				T	T								S														G	G	G										S	T	T					T	S	S								S	S	S	T	T								.	.		S						G	G	G	G	G
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		N	A	P	Q	Q	Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	.	.	.	E	A	V	V	L	A	P	Q	P	E	T	L	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q	N	Q	Q	L	T	Q	S	F	C	D	V	V	D	A	I	I
Query Conservation																					.	.	.
Alig confidence																					.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	P	F	K	Q	I	L	S	G	Y	A	E	V	Y	K	H	A	L	L	N	G	E	S	A	T	Q	D	I	E	Q	H	F	K	D	R	E	I	L	Q	S	L	N	G	M	D	K	Y	I	A	K	G	I	E	T	K	L	D	I	V	V	A	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G																																S		S							T	T	T																			S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																								.	.	.	.																				.	.	.
Query SS confidence																																																								.	.	.	.																				.	.	.
Query Sequence		A	G	G	G	M	V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	Q	.	.	.	.	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	.	.	.
Query Conservation																																																								.	.	.	.																				.	.	.
Alig confidence		.	.	.	.	.	.	.																						.	.	.																								.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.	.	.																						.	.	.
Template Sequence		.	.	.	.	.	.	.	K	E	Q	G	V	R	K	F	L	N	L	G	H	T	F	G	H	A	V	E	Y	.	.	.	Y	H	K	I	P	H	G	H	A	V	M	V	G	I	I	Y	Q	F	I	V	A	N	A	L	F	D	S	K	H	D	I	S	H	Y	I	Q	Y	L	I	Q	L	G	Y	P	L	D	G	V	Q
Template Known Secondary structure		.	.	.	.	.	.	.	T	S	S	S	G	G	G	G	G	G	T	T	T									.	.	.																									T																	T						B
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.
Template SS confidence
									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
					311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	A	E	L	E	V	D	I	N	N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	L	T	P	D	T	L	R	A	A	F	K	K	V	E	S	F
Query Conservation		.	.	.
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	L	M	R	Q	F	G	D	I	V	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	D	Q	L	T	L	Q	H	A	C	E	Q	L	K	T	Y
Template Known Secondary structure								T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.																								.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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