Job Description P45579 Confidence 22.22% Date Thu Jan 5 12:03:26 GMT 2012 Rank 235 Aligned Residues 72 % Identity 14% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.													.	.	.	.	.	.	.	.	350
Predicted Secondary structure																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	Q	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	.	.	.	.	.	.	P	T	T	L	A	E	L	E	V	D	I	N	N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	P	V	T	L	T	P	D	T	L
Query Conservation																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	S	P	E	F	R	S	K	F	M	H	M	C	S	S	I	G	I	D	P	L	S	L	F	D	R	D	K	H	L	F	T	V	N	D	F	Y	Y	E	V	C	L	K	V	I	E	I	C	R	Q	T	K	D	M	N	G	G	V	I	S	F	Q	E	L	E	K	V	H	F	R	K	L	N	V	G	L	D	D	L
Template Known Secondary structure		T	T																T							T	T	S	S	G	G	G	T	T																				T	T	T	S	S	S										T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		351	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	F	K	K	V	E	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	S	I	D	M	L	K	S	L
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions