Job Description P45579 Confidence 100.00% Date Thu Jan 5 12:03:26 GMT 2012 Rank 1 Aligned Residues 347 % Identity 30% Template c1ta9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		R	V	V	V	G	P	A	N	Y	F	S	H	P	G	S	F	N	H	L	H	D	F	F	T	D	E	Q	L	S	R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	.	.	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	E	S	G
Query Conservation																																																												.	.
Alig confidence																																																												.	.
Template Conservation
Template Sequence		R	I	F	T	S	P	Q	K	Y	V	Q	G	R	H	A	F	T	R	S	Y	M	Y	V	K	K	W	A	T	K	S	A	V	V	L	A	D	Q	N	V	W	N	I	C	A	N	K	I	V	D	S	L	S	Q	N	G	M	T	V	T	K	L	V	F	G	G	E	A	S	L	V	E	L	D	K	L	R	K	Q	C	P
Template Known Secondary structure		B						S						T	T	G	G	G	G						T	T	T		S	S														T											T	T										S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	R	S	V	V	I	G	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	G	L	P	F	V	A	V	P	T	I	A	A	T	C	A	A	W	T	P	L	S	V	W	Y	N	D	A	G	Q	A	L	H	Y	E	I	F	D	D	A	N	F	M	V	L	V	E	P	E	I	I	L	N	A	P	Q
Query Conservation
Alig confidence																																																										.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		D	D	T	Q	V	I	I	G	V	G	G	G	K	T	M	D	S	A	K	Y	I	A	H	S	M	N	L	P	S	I	I	C	P	T	T	A	S	S	D	A	A	T	S	S	L	S	V	I	Y	Q	F	Q	K	Y	S	F	.	.	.	.	Y	P	L	N	P	N	L	I	F	I	D	T	D	V	I	V	R	A	P	V
Template Known Secondary structure		T	T									S														T	T								S	S		S		S		T	T		S													.	.	.	.		S	S			S												S
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		Q	Y	L	L	A	G	I	G	D	T	L	A	K	W	Y	E	A	V	V	L	A	P	Q	P	E	T	L	.	.	.	P	L	T	V	R	L	G	I	N	N	A	Q	A	I	R	D	V	L	L	N	S	S	E	Q	A	L	S	D	Q	Q	N	Q	Q	L	T	Q	S	F	C	D	V	V	D	A	I	I	A	G	G	G
Query Conservation																													.	.	.
Alig confidence																													.	.	.																																										.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		R	F	L	I	S	G	I	G	D	A	L	S	T	W	V	E	T	E	S	V	I	R	S	N	S	T	S	F	A	G	G	V	A	S	I	A	G	R	Y	I	A	R	A	C	K	D	T	L	E	K	Y	A	L	S	A	I	L	S	N	T	R	G	V	C	T	E	A	F	E	N	V	.	.	.	.	V	E	A	N	T
Template Known Secondary structure																								T	T				T	T	S	S	B																														T										.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																								.
Query SS confidence																													.																								.
Query Sequence		M	V	G	G	L	G	D	R	F	T	R	V	A	A	A	H	A	V	H	N	G	L	T	V	L	P	Q	.	T	E	K	F	L	H	G	T	K	V	A	Y	G	I	L	V	Q	S	A	L	L	G	Q	.	D	D	V	L	A	Q	L	T	G	A	Y	Q	R	F	H	L	P	T	T	L	A	E	L	E	V	D	I	N
Query Conservation																													.																								.
Alig confidence																													.																								.
Template Conservation
Template Sequence		L	M	S	G	L	G	F	E	N	G	G	L	A	A	A	H	A	I	H	N	G	M	T	A	I	H	G	P	V	H	R	L	M	H	G	E	K	V	A	Y	G	T	L	V	Q	V	V	L	E	D	W	P	L	E	D	F	N	N	L	A	S	F	M	A	K	C	H	L	P	I	T	L	E	E	L	G	I	P	N	V
Template Known Secondary structure										S	S													G	G	G		G	G	G	G	G	S																	T	T																T	T				S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	A	E	I	D	K	V	I	A	H	T	L	R	P	V	E	S	I	H	Y	L	P	V	T	L	T	P	D	T	L	R	A	A	F	K	K	V	E	S	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	E	E	L	L	M	V	G	R	A	T	L	R	P	D	E	S	I	H	N	M	S	K	K	F	N	P	S	Q	I	A	D	A	I	K	A	V	D	S	Y	S
Template Known Secondary structure														T		T	T	S	G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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