 |
Job Description | P45579 | Confidence | 28.44% | Date | Thu Jan 5 12:03:26 GMT 2012 |
Rank | 176 | Aligned Residues | 69 |
% Identity | 16% | Template | c1ovmC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:indole-3-pyruvate decarboxylase; |
PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae
|
Resolution | 2.65 Å |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | N | H | L | H | D | F | F | T | D | E | Q | L | S | R | A | V | W | I | Y | G | K | R | A | I | A | A | . |
A | Q | T | K | L | P | P | A | F | G | L | P | G | A | K | H | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | R | G | H | C | S | E | S | D | V | Q | Q | L | A | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   | . | . |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
F | R | D | A | A | E | N | K | L | A | M | . |
. |
S | K | R | T | A | L | L | A | D | F | L | V | L | R | H | G | L | K | H | A | L | Q | K | W | V | K | E | V | P | M | A | H | A | T | M | L | M | G | K | G | I | F | D | E | R | Q | A | G | F | Y | G | T | Y | S | G | S | A | S | T | G | A | V | K | E | A | I | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | . | . |
| S | S |  |  |  |  |  |
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | S |
|
|  |  |  |  |
| T | T | T | T | T | S | S |
| T | T | S | T | T |
|
|
|
|
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | |
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | G | D | D | R | S | V | V | I | G | V | G | G |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . | . |
|
|   |
|
|   |
|
|   |
Template Sequence |   |
G | . |
. |
. |
. |
A | D | T | V | L | C | V | G | T |
Template Known Secondary structure |   |
T | . | . | . | . | S | S |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
| . | . | . | . |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
276 | |
|
|
|
. | . | . | 280 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|