Job Description P45579 Confidence 26.80% Date Thu Jan 5 12:03:26 GMT 2012 Rank 187 Aligned Residues 73 % Identity 15% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.
Predicted Secondary structure																																																											.	.	.																		.
Query SS confidence																																																											.	.	.																		.
Query Sequence		R	A	V	W	I	Y	G	K	R	A	I	A	A	A	Q	T	K	L	P	P	A	F	G	L	P	G	A	K	H	I	L	F	R	G	H	C	S	E	S	D	V	Q	Q	L	A	A	E	S	G	D	D	R	S	V	V	I	G	.	.	.	V	G	G	G	A	L	L	D	T	A	K	A	L	A	R	R	L	.	G	L
Query Conservation																																																											.	.	.																		.
Alig confidence														.	.	.																			.	.	.	.	.																				.	.	.																		.
Template Conservation														.	.	.																			.	.	.	.	.
Template Sequence		N	V	L	V	I	E	D	D	K	V	F	R	.	.	.	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	S	A	E	.	.	.	.	.	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S	P	E	T
Template Known Secondary structure														.	.	.											T							S	.	.	.	.	.	S											S			S						S	B		S	S	S	B													T	T	S
Template Predicted Secondary structure														.	.	.																			.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		112	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	V	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	I	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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