|   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | R | Q | Y | Q | A | I | R | L | D | N | G | M | V | V | L | L | V | S | D | P | Q | A | V | K | S | L | S | A | L | V | V | P | V | G | S | L | E | D | P | E | A | Y | Q | G | L | A | H | Y | L | E | H | M | S | L | M | G | S | K | K | Y | P | Q | A | D | S | L | A | E | Y | L | K | M | H | G | G | S | H | N | A |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |
| . |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
T | D | N | F | K | L | S | S | L | A | N | G | L | K | V | A | T | S | N | T | P | G | . |
H | F | S | A | L | G | L | Y | I | D | A | G | S | R | F | E | G | R | N | L | K | G | C | T | H | I | L | D | R | L | A | F | K | S | T | E | H | V | E | . |
G | R | A | M | A | E | T | L | E | L | L | G | G | N | Y | Q | C |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |
| T | T | S |
|  |  |  |  |  | S |
|
|
| . | S | S |  |  |  |  |  |  |  | S |
|
| G | G | G |
| T | T | T | T | T | T |  |  |  |  |  |  |  | T | T | T | S |
| B | T | T | B |
| . |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | A | P | Y | R | T | A | F | Y | L | E | V | E | N | D | A | L | P | G | A | V | D | R | L | A | D | A | I | A | E | P | L | L | D | K | K | Y | A | E | R | E | R | N | A | V | N | A | E | L | T | M | A | R | T | R | D | G | M | R | M | A | Q | V | S | A | E | T | I | N | P | A | H | P | G | S | K | F | S | G |
Query Conservation |   |
  |
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | S | S | R | E | N | L | M | Y | Q | A | S | V | F | N | Q | D | V | G | K | M | L | Q | L | M | S | E | T | V | R | F | P | K | I | T | E | Q | E | L | Q | E | Q | K | L | S | A | E | Y | E | I | D | E | V | W | M | K | P | E | L | V | L | P | E | L | L | H | T | A | A | Y | S | G | E | T | L | G | S | P | L | I |
Template Known Secondary structure |   |
 |  |
| S | S |
|  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |
| B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | G | G | G | S |
| S | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | L | E | T | L | S | D | K | P | G | N | P | V | Q | Q | A | L | K | D | F | H | E | K | Y | Y | S | A | N | L | M | K | A | V | I | Y | S | N | K | P | L | P | E | L | A | K | M | A | A | D | T | F | G | R | V | P | N | K | E | S | K | K | P | E | I |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|   | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
| . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
C | P | R | G | L | I | P | S | I | S | . |
. |
. |
. |
K | Y | Y | L | L | D | Y | R | N | K | F | Y | T | P | E | N | T | V | A | A | F | V | G | . |
V | P | H | E | K | A | L | E | L | T | G | K | Y | L | G | D | W | Q | S | T | H | P | P | I | T | K | K |
Template Known Secondary structure |   |
|
| G | G | G | G | G | G |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  | S | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | |
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |