Return to main results Retrieve Phyre Job Id

Job DescriptionP05458
Confidence100.00%DateThu Jan 5 10:58:43 GMT 2012
Rank27Aligned Residues216
% Identity13%Templated1bccb1
SCOP infoLuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like
Resolution3.16

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  SDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGG
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Template Sequence  PPHP. QDLEITKLPNGLVIASLENYS. PGSTIGVFIKAGSRYENSSNLGTSHLLRLASSLTTKGAS. SFKITRGIEAVGG
Template Known Secondary structure 

S
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B


SSS
B
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.SS
SGGG
BTTBTTGGGS
BSSS
.T
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   18.20. ........30.........40.. .......50.........60.........70.........80. ........90....
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  SHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGS
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Template Sequence  KLSVESTRENMAYTVECLRDDVEILMEFLLNVTTAPEFRPWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAY. RNALA
Template Known Secondary structure  TTST
B


TTTTTS
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   95....100.........110.........120.........130.........140.........150.........160........ .170...
 
   197..200.........210.........220.........230.........240.........250.........260.
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Query Sequence  KFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESK
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Template Sequence  DSLYCPDYRIGKVT. . . . SVELHDFVQNHFTSARMALVGLG. VSHPVLKNVAEQLLNIRGGLGLS
Template Known Secondary structure  S
SS

GGGGGG

....TTS
GGGSS.S
TT

S


TT
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   174.....180....... ..190.........200.........210 .........220.........230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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