Job Description P05458 Confidence 99.76% Date Thu Jan 5 10:58:43 GMT 2012 Rank 37 Aligned Residues 176 % Identity 12% Template c3ivlA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative zinc protease; PDBTitle: the crystal structure of the inactive peptidase domain of a putative2 zinc protease from bordetella parapertussis to 2.2a Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.					.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.		.	.	.
Predicted Secondary structure																																				.	.	.	.																																							.
Query SS confidence																																				.	.	.	.																																							.
Query Sequence		N	S	T	D	S	A	L	A	A	V	F	V	P	T	G	Y	D	E	Y	T	S	S	A	Y	S	S	L	L	G	Q	I	V	Q	P	.	.	.	.	W	F	Y	N	Q	L	R	T	E	E	Q	L	G	Y	A	V	F	A	F	P	M	S	V	G	R	Q	W	G	M	G	F	L	L	Q	S	N	D	K	.	Q	P	S
Query Conservation																																				.	.	.	.																																							.
Alig confidence																																				.	.	.	.										.																													.
Template Conservation																																																	.
Template Sequence		R	A	G	G	T	P	L	V	A	A	X	Y	H	L	P	A	A	G	S	P	D	F	V	G	L	D	L	A	A	T	I	L	A	D	T	P	S	G	R	L	Y	H	A	L	V	P	T	.	K	L	A	S	G	V	F	G	F	T	X	D	Q	L	D	P	G	L	A	X	F	G	A	Q	L	Q	P	G	X	D	Q	D
Template Known Secondary structure			S															T	T	S	T													T		T	T	T	S							T	T	T	.	T	S		S								T	T	S	S	S											T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	W	E	R	Y	K	A	F	F	P	T	A	E	A	K	L	R	A	M	K	P	D	E	F	A	Q	I	Q	Q	A	V	I	T	Q	M	L	Q	A	P	Q	T	L	G	E	E	A	S	K	L	S	K	D	F	D	R	G	N	M	R	F	D	S	R	D	K	I	V	A	Q	I	K	L	L	T	P	Q	K	L	A
Query Conservation
Alig confidence																	.	.																																									.	.
Template Conservation																	.	.																																									.	.
Template Sequence		K	A	L	Q	T	L	T	A	T	L	E	S	L	S	S	.	.	K	P	F	S	Q	E	E	L	E	R	A	R	S	K	W	L	T	A	W	Q	Q	T	Y	A	D	P	E	K	V	G	V	A	L	S	E	A	I	A	S	G	.	.	D	W	R	L	F	F	L	Q	R	D	R	V	R	D	A	K	L	D	D	V	Q
Template Known Secondary structure												T		T	T	T	.	.	S																								S														T	T	.	.		T	T
Template Predicted Secondary structure																	.	.																																									.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		907	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	F	H	Q	A	V	V	E	P	Q	G	M	A	I	L	S	Q	I	S	G	S	Q	N	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	V	A	Y	L	V	R	S	N	R	T	E	G	R	Y	I	P	T	E	K	P	Q	R	A
Template Known Secondary structure								S	S	G	G	G															T
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions