Job Description P05458 Confidence 100.00% Date Thu Jan 5 10:58:43 GMT 2012 Rank 17 Aligned Residues 401 % Identity 13% Template c3d3yA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a conserved protein from enterococcus faecalis2 v583 Resolution 1.95 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		I	R	L	D	N	G	M	V	V	L	L	V	S	D	P	Q	A	V	K	S	L	S	A	L	V	V	P	V	G	S	L	E	D	P	E	A	Y	Q	G	L	A	H	Y	L	E	H	M	S	L	M	G	S	K	K	Y	P	Q	A	D	S	L	A	E	Y	L	K	M	H	.	G	G	S	H	N	A	S	T	A	P	Y
Query Conservation																																																																						.
Alig confidence																																				.	.	.																																.
Template Conservation																																				.	.	.
Template Sequence		V	Q	L	V	K	G	V	N	L	H	V	I	P	T	E	K	Y	K	T	V	R	L	L	V	R	F	N	T	R	L	N	H	E	T	.	.	.	I	T	K	R	T	L	L	S	S	L	X	E	T	N	S	L	N	Y	P	N	Q	V	K	L	S	E	R	L	A	E	L	Y	G	A	S	F	G	I	G	V	S	K	K
Template Known Secondary structure						T	T									S	S		S														T	T	T	.	.	.																S	S	S		S											T	T	S
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.												.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		R	T	A	F	Y	L	E	.	.	.	.	.	.	.	.	.	.	.	V	E	N	D	A	L	P	G	A	V	D	R	L	A	D	A	I	A	E	P	.	.	.	.	.	L	L	D	K	K	Y	A	E	R	E	R	N	A	V	N	A	E	L	T	M	A	R	T	R	D	G	M	R	M	A	Q	V	S	A	E	T	I
Query Conservation									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		G	N	Q	H	W	F	N	I	S	X	N	I	V	N	D	H	Y	L	Q	D	S	Q	V	L	A	E	A	V	D	F	L	K	E	I	I	F	A	P	N	I	Q	A	G	Q	F	E	A	E	T	F	Q	R	E	K	E	N	L	K	A	Y	L	E	S	I	V	E	D	K	Q	T	Y	A	S	L	A	L	Q	S	V	Y
Template Known Secondary structure		T	T													G	G	G		S	S																	S		S			T	T																								S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		N	.	P	A	H	P	G	S	K	F	S	G	G	N	L	E	T	L	S	D	K	P	G	N	P	V	Q	Q	A	L	K	D	F	H	E	K	Y	Y	S	A	N	L	M	K	A	V	I	Y	S	N	K	P	L	P	E	L	A	K	M	A	A	D	T	F	G	R	V	P	N	K	E	S	K	K	P	E	I	T	V	P
Query Conservation			.
Alig confidence			.																					.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		F	N	Q	S	E	D	Q	K	I	P	S	F	G	T	V	A	A	L	A	E	E	T	.	.	.	.	A	A	S	L	A	A	Y	Y	Q	K	X	L	A	E	D	Q	V	D	I	F	V	L	G	D	V	N	E	A	E	L	V	P	L	F	K	Q	L	P	F	T	P	R	E	E	G	K	A	A	I	F	Y	N	Q	P
Template Known Secondary structure		T	T	T		T	T	T	T	S		T	T											.	.	.	.															S									S												T	S												S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		V	V	T	D	A	Q	K	G	I	I	I	H	Y	V	P	A	L	P	R	K	V	L	R	V	E	F	R	I	D	N	N	S	A	K	F	R	S	K	T	D	E	L	I	T	Y	L	I	G	N	R	S	P	G	T	L	S	D	W	L	Q	.	K	Q	G	L	V	E	G	I	S	A	N	S	D	P	I	V	N	G	N
Query Conservation																																																														.
Alig confidence							.	.	.																																																					.													.	.	.	.
Template Conservation							.	.	.																																																																		.	.	.	.
Template Sequence		I	R	N	V	I	.	.	.	E	E	R	T	E	R	E	V	L	A	Q	S	K	L	N	L	A	Y	N	T	D	I	Y	Y	G	D	S	Y	Y	F	A	L	Q	V	F	N	G	I	F	G	G	F	P	H	S	K	L	F	X	N	V	R	E	K	E	H	L	A	Y	Y	A	S	S	S	I	.	.	.	.	D	T	F
Template Known Secondary structure				S	S		.	.	.										S	S													T	T	S	T	T												T	T	S	T	T	S						T	T	T	T	S				S							.	.	.	.		T	T
Template Predicted Secondary structure							.	.	.																																																																		.	.	.	.
Template SS confidence
		236	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	L	A	I	S	A	S	L	T	D	K	G	L	A	N	R	D	Q	V	V	A	A	I	F	S	Y	L	N	L	L	R	E	K	G	I	D	K	Q	Y	F	D	E	L	A	N	V	L	D	I	D	F	R	Y	P	S	I	T	R	D	M	D	Y	V	E	W	L	A	D	T	M	I	R	V	P	V	E	H	T
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		R	G	F	X	T	V	Q	T	G	I	D	G	K	.	.	.	N	R	N	Q	V	L	R	L	I	S	T	E	L	E	N	I	R	L	G	K	I	R	E	L	E	I	E	Q	T	K	A	X	L	K	N	Q	Y	I	L	A	L	D	N	A	G	A	W	L	E	K	E	Y	L	N	E	L	X	P	Q	T	X	L	T	A
Template Known Secondary structure		T	T										G	G	.	.	.	G																	T	T																						T	S															S	T	T	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	V	N	I	A	D	R	Y	D	A	K	A	V	K	E	R	L	A	M	M	T	P	Q	N	A	R	I	W	Y	I	S	P	K	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	W	I	A	R	I	N	A	V	T	I	P	E	I	Q	E	V	A	K	R	L	E	L	Q	A	I	F	F	L	E	G	E	T	E	N	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.