Job Description P05458 Confidence 100.00% Date Thu Jan 5 10:58:43 GMT 2012 Rank 16 Aligned Residues 406 % Identity 16% Template c3amjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:zinc peptidase inactive subunit; PDBTitle: the crystal structure of the heterodimer of m16b peptidase from2 sphingomonas sp. a1 Resolution 3.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		Q	Y	Q	A	I	R	L	D	N	G	M	V	V	L	L	V	S	D	P	Q	A	V	K	S	L	S	A	L	V	V	P	V	G	S	L	E	D	P	E	A	Y	Q	G	L	A	H	Y	L	E	H	M	S	L	M	G	S	K	K	Y	P	Q	.	.	.	A	D	S	L	A	E	Y	L	K	M	H	G	G	S	H	N
Query Conservation																																																															.	.	.
Alig confidence																																																															.	.	.
Template Conservation
Template Sequence		K	I	E	H	W	T	A	P	S	G	A	Q	V	Y	Y	V	E	N	R	T	L	P	M	L	D	V	Q	V	D	F	D	A	G	S	A	R	E	P	A	D	Q	V	G	V	A	S	M	T	A	S	L	M	D	A	G	T	G	S	G	K	S	A	L	D	E	N	A	I	A	D	R	L	A	D	I	G	A	R	L	G
Template Known Secondary structure									T	T	S										S	S	S									S		S	G	G	G	S		T	T	S	T	T								T	G	G	G				S	T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		A	S	T	A	P	Y	R	T	A	F	Y	L	E	V	E	N	D	A	.	.	L	P	G	A	V	D	R	L	A	D	A	I	A	E	P	L	L	D	K	K	Y	A	E	R	E	R	N	A	V	N	A	E	L	T	M	A	R	T	R	D	G	M	R	M	A	Q	V	S	A	E	T	I	N	P	A	H	P	G	S	K
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		G	G	A	E	A	D	R	A	S	F	S	L	R	V	L	S	S	P	A	E	R	N	S	A	L	T	I	L	R	D	I	L	A	H	P	T	F	P	A	P	V	L	E	R	E	R	A	R	A	I	A	G	L	R	E	A	Q	T	Q	P	G	S	I	L	G	R	R	F	T	E	L	A	Y	G	K	H	P	Y	G	H
Template Known Secondary structure						S	S										S	S																		B																						T	T	S															T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	G	N	L	E	T	L	S	D	K	P	G	N	P	V	Q	Q	A	L	K	D	F	H	E	K	Y	Y	S	A	N	L	M	K	A	V	I	Y	S	N	K	P	L	P	E	L	A	K	M	A	A	D	T	F	G	R	V	P	N	K	E	S	K	K	P	E	I	T	V	P	V	V	T	D	A	Q	K	G	I
Query Conservation
Alig confidence		.	.												.	.	.	.																																																											.	.	.	.
Template Conservation		.	.												.	.	.	.																																																											.	.	.	.
Template Sequence		.	.	V	S	S	V	A	T	L	Q	K	I	S	.	.	.	.	R	D	Q	L	V	S	F	H	R	T	H	Y	V	A	R	T	A	V	V	T	L	V	G	D	I	T	R	A	E	A	E	T	I	A	Q	Q	L	T	A	D	L	P	A	G	A	T	L	P	P	L	P	D	P	A	M	P	R	A	.	.	.	.	T
Template Known Secondary structure		.	.												.	.	.	.												S		T	T	S								S													T	T	T	T	S																		.	.	.	.
Template Predicted Secondary structure		.	.												.	.	.	.																																																											.	.	.	.
Template SS confidence
				183	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	H	Y	V	P	A	L	P	R	K	V	L	R	V	E	F	R	I	D	N	N	S	A	K	F	R	S	K	T	D	E	L	I	T	Y	L	I	G	N	R	S	P	G	T	L	S	D	W	L	Q	K	Q	G	L	V	E	G	I	S	A	N	S	D	P	I	V	N	G	N	S	G	V	L	A	I	S	A	S	L
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		V	E	R	I	A	N	P	A	T	Q	A	H	I	A	I	G	M	P	T	L	K	R	G	D	.	P	D	F	F	P	L	V	V	G	N	Y	A	L	G	G	G	G	F	E	S	R	L	M	K	E	I	R	D	K	R	G	L	S	Y	G	A	Y	S	Y	F	S	P	Q	K	S	M	G	L	F	Q	I	G	F	E	T
Template Known Secondary structure								S	S	S												B	T	T		.	T	T												T	T	S	G	G	G	S							T	T	T	T													B	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	K	G	L	A	N	R	D	Q	V	V	A	A	I	F	S	Y	L	N	L	L	R	E	K	G	I	D	K	Q	Y	F	D	E	L	A	N	V	L	D	I	D	F	R	Y	P	S	I	T	R	D	M	D	Y	V	E	W	L	A	D	T	M	I	R	V	P	V	E	H	T	L	D	A	V	N	I	A	D	R	Y
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		R	A	E	.	.	.	K	A	D	E	A	V	Q	V	A	N	D	T	L	D	A	F	L	R	E	G	P	T	D	A	E	L	Q	A	A	K	D	N	L	I	N	G	F	A	L	R	L	D	S	N	A	K	I	L	G	Q	V	A	V	I	G	Y	Y	G	L	P	L	D	Y	L	D	H	Y	T	E	R	V	Q	A	V
Template Known Secondary structure			S	T	.	.	.	T																																			T	S	G	G	G	G	S	S														T	T			T	T	T	T	T	S							T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		332	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		438	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		D	A	K	A	V	K	E	R	L	A	.	M	M	T	P	Q	N	A	R	I	W	Y	I	S	P	K
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		T	V	E	Q	V	R	E	A	F	A	R	H	V	K	R	E	N	L	I	T	V	V	V	G	G	K
Template Known Secondary structure																G	G	G
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.