Job Description P05458 Confidence 100.00% Date Thu Jan 5 10:58:43 GMT 2012 Rank 8 Aligned Residues 416 % Identity 16% Template c3amiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:zinc peptidase; PDBTitle: the crystal structure of the m16b metallopeptidase subunit from2 sphingomonas sp. a1 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	N	R	Q	Y	Q	A	I	R	L	D	N	G	M	V	V	L	L	V	S	D	P	Q	A	V	K	S	L	S	A	L	V	V	P	V	G	S	L	E	D	P	E	A	Y	Q	G	L	A	H	Y	L	E	H	M	S	L	M	G	S	K	K	Y	P	Q	A	D	S	L	A	E	Y	L	K	M	H	G	G	S	H
Query Conservation
Alig confidence										.																																																								.
Template Conservation										.																																																								.
Template Sequence		P	A	A	S	T	F	E	T	.	T	L	P	N	G	L	K	V	V	V	R	E	D	H	R	A	P	T	L	V	H	M	V	W	Y	R	V	G	S	M	D	E	T	T	G	T	T	G	V	A	H	A	L	E	H	M	M	F	K	G	T	K	D	V	G	.	P	G	E	F	S	K	R	V	A	A	M	G	G	R	D
Template Known Secondary structure			G	G	G					.			T	T	S										S	S	S									S			G	G	G			T	T		T	T									T	T	S		B	S	S	S		.	T	T										T
Template Predicted Secondary structure										.																																																								.
Template SS confidence
		29	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		N	A	S	T	A	P	Y	R	T	A	F	Y	L	E	V	E	N	D	A	L	P	G	A	V	D	R	L	A	D	A	I	A	E	P	L	L	D	K	K	Y	A	E	R	E	R	N	A	V	N	A	E	L	T	M	A	R	T	R	.	D	G	M	R	M	A	Q	V	S	A	E	T	I	N	P	A	H	P	G	S	K
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		N	A	F	T	T	R	D	Y	T	A	Y	Y	Q	Q	V	P	S	S	R	L	S	D	V	M	G	L	E	A	D	R	M	A	N	L	V	V	D	D	E	L	F	K	K	E	I	Q	V	I	A	E	E	R	R	W	R	T	D	D	K	P	R	S	K	A	Y	E	A	L	M	A	A	S	Y	V	A	H	P	Y	R	V
Template Known Secondary structure							S	S										G	G	G															B																					T	T	T	T	S															S	S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	G	N	L	E	T	L	S	D	K	P	G	N	P	V	Q	Q	A	L	K	D	F	H	E	K	Y	Y	S	A	N	L	M	K	A	V	I	Y	S	N	K	P	L	P	E	L	A	K	M	A	A	D	T	F	G	R	V	P	N	K	E	S	K	K	P	E	I	T	V	P	V	V	T	D	A	Q	K	G	I
Query Conservation
Alig confidence															.	.	.	.																																																													.	.
Template Conservation															.	.	.	.																																																													.	.
Template Sequence		P	V	I	G	W	M	N	D	I	Q	N	M	T	.	.	.	.	A	Q	D	V	R	D	W	Y	K	R	W	Y	G	P	N	N	A	T	V	V	V	V	G	D	V	E	H	E	A	V	F	R	L	A	E	Q	T	Y	G	K	L	A	R	V	E	A	P	A	R	K	Q	Q	G	E	P	Q	Q	A	G	V	.	.	R
Template Known Secondary structure			T	T											.	.	.	.													S	G	G	G								S												T	T	G	G	G	S																		S		.	.
Template Predicted Secondary structure															.	.	.	.																																																													.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																						.	.	.																																.
Query SS confidence																						.	.	.																																.
Query Sequence		I	I	H	Y	V	P	A	L	P	R	K	V	L	R	V	E	F	R	I	D	.	.	.	N	N	S	A	K	F	R	S	K	T	D	E	L	I	T	Y	L	I	G	N	R	S	P	G	T	L	S	D	W	L	Q	.	K	Q	G	L	V	E	G	I	S	A	N	S	D	P	I	V	N	G	N	S	G	V	L	A	I
Query Conservation																						.	.	.																																.
Alig confidence																						.	.	.																																.
Template Conservation
Template Sequence		R	V	T	V	K	A	P	A	E	L	P	Y	L	A	L	A	W	H	V	P	A	I	V	D	L	D	K	S	R	D	A	Y	A	L	E	I	L	A	A	V	L	D	G	Y	D	G	A	R	M	T	R	Q	L	V	R	G	N	K	H	A	V	S	A	G	A	G	Y	D	S	L	S	R	G	Q	Q	G	L	F	I	L
Template Known Secondary structure										S	S													S	S	T	T	S																S	S	T	T	S						T	T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	L	T	D	K	G	L	A	N	R	D	Q	V	V	A	A	I	F	S	Y	L	N	L	L	R	E	K	G	I	D	K	Q	Y	F	D	E	L	A	N	V	L	D	I	D	F	R	Y	P	S	I	T	R	D	M	D	Y	V	E	W	L	A	D	T	M	I	R	V	P	V	E	H	T	L	D	A	V	N	I
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		E	G	V	P	S	K	G	.	.	V	T	I	A	Q	L	E	T	D	L	R	A	Q	V	R	D	I	A	A	K	G	V	T	E	A	E	L	S	R	V	K	S	Q	M	V	A	G	K	V	Y	E	Q	D	S	L	M	G	Q	A	T	Q	I	G	G	L	E	V	L	G	L	S	W	R	D	D	D	R	F	Y	Q	Q
Template Known Secondary structure							T	T	.	.																																												S													T	T	T			T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		341	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		A	D	R	Y	D	A	K	A	V	K	E	R	L	A	.	M	M	T	P	Q	N	A	R	I	W	Y	I	S	P	K	E	P
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		L	R	S	V	T	A	A	E	V	K	A	A	A	A	R	L	L	T	D	D	T	L	T	V	A	N	L	V	P	L	P	P
Template Known Secondary structure			T	T											G	G	G	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450