Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 58 Aligned Residues 348 % Identity 22% Template c3toyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of enolase brado_4202 (target efi-501651) from2 bradyrhizobium sp. ors278 with calcium and acetate bound Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		T	T	P	V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	.	.	.	.	.	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y
Query Conservation																																																									.	.	.	.	.
Alig confidence																																																									.	.	.	.	.
Template Conservation
Template Sequence		T	T	A	A	I	T	G	V	T	A	R	A	V	I	T	P	M	K	R	P	L	R	N	A	F	G	V	I	D	S	G	P	L	V	L	I	D	V	T	T	D	Q	G	V	T	G	H	S	Y	L	F	A	Y	T	R	L	A	L	K	P	L	V	H	L	V	E	D	I	G	R	E	L	A	G	K	A	L	V	P	V
Template Known Secondary structure					B																				T	T																T	T	S										S	S	G	G	G																T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																																								.															.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																																								.															.	.	.	.	.	.	.	.
Template Sequence		D	L	M	K	A	M	D	A	.	.	.	.	.	.	.	.	.	.	K	F	R	L	L	G	W	Q	G	L	V	G	M	A	V	S	G	L	D	M	A	F	W	D	A	L	G	Q	L	A	G	K	P	V	V	E	L	L	G	.	G	S	A	R	P	I	P	A	Y	D	S	Y	G	V	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.		T	T	T	T			S	T																						T	S	B					T	T	.													S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																								.															.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P	N	G	A
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	R	D	D	E	R	T	L	R	T	A	C	D	E	H	.	G	F	R	A	I	K	S	K	G	G	H	G	D	L	A	T	D	E	A	M	I	K	G	L	R	A	L	L	G	P	D	I	A	L	M	L	D	F	N	Q	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T										T	S	.											S	S																		T	T	S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																							143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.
Predicted Secondary structure																	.																																																													.
Query SS confidence																	.																																																													.
Query Sequence		W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.	H	F	W
Query Conservation																	.																																																													.
Alig confidence																	.														.	.	.	.																																												.
Template Conservation																															.	.	.	.
Template Sequence		L	D	P	A	E	A	T	R	R	I	A	R	L	A	D	Y	D	L	T	W	I	E	E	P	V	P	Q	E	N	.	.	.	.	L	S	G	H	A	A	V	R	E	R	S	E	I	P	I	Q	A	G	E	N	W	W	F	P	R	G	F	A	E	A	I	A	A	G	A	S	D	F	I	M	P	D	L	M	K	V	G
Template Known Secondary structure		S													G	G	G			S						S		T	T		.	.	.	.												S	S						T	T														T			S						T	T	T	T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G
Query Conservation
Alig confidence																											.	.	.	.	.	.																	.	.	.	.	.																						.
Template Conservation																											.	.	.	.	.	.																	.	.	.	.	.																						.
Template Sequence		G	I	T	G	W	L	N	V	A	G	Q	A	D	A	A	S	I	P	M	S	S	H	I	L	P	.	.	.	.	.	.	E	A	S	A	H	V	L	P	V	T	P	T	A	H	F	L	.	.	.	.	.	E	V	L	D	F	A	G	A	I	L	T	E	P	L	R	V	I	D	G	K	V	.	T	A	K	G	P	G
Template Known Secondary structure																	T			B				S			.	.	.	.	.	.							G	G	G		T	T	B				.	.	.	.	.					S	S	G	G	G	B	S	S					B	T	T			.					S	B
Template Predicted Secondary structure																											.	.	.	.	.	.																	.	.	.	.	.																						.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	A	W	N	E	S	A	V	A	K	Y
Template Known Secondary structure		T	S			B
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions