Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 46 Aligned Residues 349 % Identity 17% Template c3tj4B_ PDB info PDB header:lyase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of an enolase from agrobacterium tumefaciens (efi2 target efi-502087) no mg Resolution 1.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	.	.	.	.	.	.	.	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y	K
Query Conservation																																																						.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	A	V	E	P	F	I	L	H	L	P	.	.	.	.	.	.	.	.	.	.	.	L	T	H	W	G	V	V	G	A	K	I	T	T	S	D	G	I	E	G	Y	G	F	T	G	T	H	A	H	L	P	S	D	R	L	I	T	S	C	I	S	D	C	Y	A	P	L	L	L	G	E	D	A	S	D	H	S
Template Known Secondary structure		B													.	.	.	.	.	.	.	.	.	.	.														T	T	S																										T	T					T	T	S	B	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.												.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T	P
Query Conservation
Alig confidence												.	.	.	.	.	.	.																																								.															.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.																																								.															.	.	.	.	.	.	.	.	.
Template Sequence		R	L	W	T	K	L	A	R	Y	P	.	.	.	.	.	.	.	S	L	Q	W	V	G	R	A	G	I	T	H	L	A	L	A	A	V	D	V	A	L	W	D	I	K	A	K	K	A	G	V	P	L	W	H	Y	L	G	.	G	A	R	T	A	G	V	E	A	Y	N	T	D	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T			.	.	.	.	.	.	.					T		S	S	S																						T	S	B					T	T	.			S		S								T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.																																								.															.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P	N	G	A	W
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	L	S	F	T	L	E	D	L	L	A	G	S	A	R	A	V	E	E	D	.	G	F	T	R	L	K	I	K	V	G	H	D	D	P	N	I	D	I	A	R	L	T	A	V	R	E	R	V	D	S	A	V	R	I	A	I	D	G	N	G	K	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S															T	T	.												S	S															S		T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
																		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.
Predicted Secondary structure																.																																																													.
Query SS confidence																.																																																													.
Query Sequence		S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.	H	F	W	T
Query Conservation																.																																																													.
Alig confidence																.														.	.	.	.																																												.
Template Conservation																														.	.	.	.
Template Sequence		D	L	P	T	C	Q	R	F	C	A	A	A	K	D	L	D	I	Y	W	F	E	E	P	L	W	Y	D	D	.	.	.	.	V	T	S	H	A	R	L	A	R	N	T	S	I	P	I	A	L	G	E	Q	L	Y	T	V	D	A	F	R	S	F	I	D	A	G	A	V	A	Y	V	Q	P	D	V	T	R	L	G	G
Template Known Secondary structure													T	T	T	S							S		S		T	T		.	.	.	.												S	S						T	T			S										T	T			S						T	T	T	T	T
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G	L
Query Conservation
Alig confidence																							.	.	.	.																							.	.	.	.	.
Template Conservation																							.	.	.	.																							.	.	.	.	.
Template Sequence		I	T	E	Y	I	Q	V	A	D	L	A	L	A	H	R	L	P	V	V	P	H	.	.	.	.	A	G	E	M	S	Q	V	H	V	H	L	S	Y	W	H	P	A	S	T	I	L	E	.	.	.	.	.	Y	I	P	W	I	K	D	H	F	E	E	P	I	H	V	R	D	G	V	Y	K	R	P	E	Q	P	G	A
Template Known Secondary structure															T	T			B				.	.	.	.		T	T	T	T	T	T									T	T	B					.	.	.	.	.				S	S	G	G	G	B	S	S						T	T							S	S	B
Template Predicted Secondary structure																							.	.	.	.																							.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.						.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	I	D	M	D	Q	V	M	K	A	H	E	L	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	T	P	L	A	E	S	F	T	R	Y	G	K	A	V	K
Template Known Secondary structure		S			B
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions