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Job DescriptionP0AES2
Confidence100.00%DateThu Jan 5 11:24:05 GMT 2012
Rank20Aligned Residues360
% Identity21%Templatec3thuC_
PDB info PDB header:lyaseChain: C: PDB Molecule:mandelate racemase / muconate lactonizing enzyme family PDBTitle: crystal structure of an enolase from sphingomonas sp. ska58 (efi2 target efi-501683) with bound mg
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60..... ....70.........80.
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Query Sequence  TTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTL. . . . EDAIPLVVGKTLGEYK
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Template Sequence  MMPKIIDAKVIIT. . . . . . . . . . . . . . CPGRNFVTLKIMTDEGVYGLGDATLNGRELAVASYLTDHVIPCLIGRDAHRIE
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   0.........10.. .......20.........30.........40.........50.........60.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  NVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATP
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Template Sequence  DLWQYLYKGAYWRR. . . . . . . . . . GPVTMTAIAAVDMALWDIKGKIAGLPVYQLLG. GASREGVMVYGHAN. . . . . . . . .
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   66...70......... 80.........90.........100.........110. ........120.....
 
   162.......170.........180.........190.........200.........210.
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Query Sequence  LPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . GTTIEDTVKVALDYQAQ. GYKAIRLQCGVPGMASTYGVSKDKYFYEPADADLPTENIWNT
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   126...130.........140.. .......150.........160.........170.........180....
 
   212.......220....... ..230.........240.........250.... .....260.........270.........280.......
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Query Sequence  . . AGEEEAESIVALAQRF. PQARITLDPNGAWSLNEAIKIGKYLKG. SLAYAEDPCGAEQGFSGREVMAEFRRATGLPTA
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Template Sequence  SKYLRIVPELFKAARESLGWDVHLLHDIHHRLTPIEAGRLGQDLEPYRPFWLEDATPAEN. . . . QEAFRLIRQHTTAPLA
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GGG

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   185....190.........200.........210.........220.........230.........240.... .....250.........260
 
   288.290.........300.........310.... .....320.........330.........340.. .......350.........360.....
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Query Sequence  TNMIATDWRQMGHTLSLQSVDIPLADP. HFWTMQGSVRVAQMCHEFGLTWGSHSNN. HFDISLAMFTHVAAAAPGKITAI
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Template Sequence  VGEIFNSIWDAKDLIQNQLIDYIRATVVHAGGITHLRRIAALADLYQIRTGCHGATDLSPVCMAAALHFDLSVPNFGIQE
Template Known Secondary structure 
TT

SGGGTTT

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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   366...370.........380.........390.........400.........410.........420......
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Query Sequence  DTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAM
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Template Sequence  YMR. . HMPETDAVFPHAYTFADGMMHPGDQPGLGVDIDEDLAAGYEYKRAFLPVNRLEDGT
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   341.. ......350.........360.........370.........380.........390.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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