Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 37 Aligned Residues 352 % Identity 22% Template c3sjnB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	I	R	K	T	L	E	D	.	.	.	.	.	.	.	.	.	.	A	I	P	L	V	V	G	K	T	L	G
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		K	I	T	D	I	E	V	L	H	L	R	V	P	A	M	D	A	D	C	E	W	G	E	D	A	.	.	.	.	.	V	I	V	K	V	H	T	D	K	G	I	V	G	V	G	E	A	D	S	S	P	L	V	V	Q	A	C	I	E	A	P	Q	T	N	F	Y	C	N	G	L	K	R	L	L	I	G	E	N	A	L
Template Known Secondary structure		B											S	S		T	T	S				T	T	S			.	.	.	.	.								T	T	S								S	S														S	B	T	T	B								T	T	S	B	T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.																																	.														.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.																																	.														.	.	.	.	.	.	.
Template Sequence		E	I	E	R	L	W	N	K	M	Y	W	G	S	N	Y	M	G	R	.	.	.	.	.	.	.	.	.	R	G	A	G	I	H	A	I	S	A	I	D	I	A	L	W	D	I	A	G	Q	F	Y	G	V	P	V	H	T	L	L	G	.	G	K	Y	R	D	K	I	R	C	Y	G	T	F	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	T	T		S	.	.	.	.	.	.	.	.	.	S	T																						T	S	B					T	T	.			S		S									.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																	.														.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.
Predicted Secondary structure																																																							.	.																	.
Query SS confidence																																																							.	.																	.
Query Sequence		A	T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	.	.	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D
Query Conservation																																																							.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.													.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	A	D	K	P	E	D	N	V	A	I	V	Q	G	L	K	D	Q	.	G	F	S	S	I	K	F	G	G	G	V	M	G	D	D	P	D	T	D	Y	A	I	V	K	A	V	R	E	A	A	G	P	E	M	E	V	Q	I	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	G	G	G	G											.	T		S						S	T	T	T	T	T																		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
																							141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		236	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure							.															.
Query SS confidence							.															.
Query Sequence		P	N	G	A	W	.	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D
Query Conservation							.															.
Alig confidence							.															.														.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		L	A	S	K	W	H	T	C	G	H	S	A	M	M	A	K	R	L	E	E	F	N	L	N	W	I	E	E	P	V	L	A	D	S	.	.	.	.	L	I	S	Y	E	K	L	S	R	Q	V	S	Q	K	I	A	G	G	E	S	L	T	T	R	Y	E	F	Q	E	F	I	T	K	S	N	A	D	I	V	Q	P	D
Template Known Secondary structure			T	T	T	T		S											T	T	T	T	T		S					S	S		T	T		.	.	.	.									T	T		S	S						T	T																	S					B
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		314		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		P	.	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V
Query Conservation			.
Alig confidence			.																										.																								.
Template Conservation																													.																								.
Template Sequence		I	T	R	C	G	G	I	T	E	M	K	K	I	Y	D	I	A	Q	M	N	G	T	Q	L	I	P	H	.	G	F	S	T	G	I	L	L	H	A	S	V	H	F	L	A	A	C	E	Q	G	T	L	.	M	E	F	S	Q	S	S	S	P	L	F	T	S	L	V	K	N	Q	L	Q	F	D	N	G	F	V	A	V
Template Known Secondary structure		T	T	T	S	S															T	T						B	.			S														T	S	T	T				.														S	B	T	T						T	T
Template Predicted Secondary structure																													.																								.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	A	P	G	L	G	I	E	L	D	E	E	L	I	A	K	Y
Template Known Secondary structure				S	S	B	T				B
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions