Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 76 Aligned Residues 345 % Identity 20% Template c3n4fD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from geobacillus sp. y412mc10 Resolution 1.88 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	.	.	.	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y	K	N	V	L	T
Query Conservation																						.	.	.
Alig confidence																						.	.	.										.																						.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																		.																						.	.	.	.	.	.																.	.	.	.	.
Template Sequence		K	V	E	K	I	E	F	A	K	L	T	G	E	R	A	R	S	A	G	A	N	G	R	I	G	V	H	G	K	S	C	T	.	V	D	I	A	R	I	T	I	D	G	Q	T	G	Y	G	S	S	I	H	X	T	.	.	.	.	.	.	P	E	W	A	E	D	V	I	G	R	R	L	L	D	L	.	.	.	.	.
Template Known Secondary structure		B																			B		S	S	S									.									T	T									S			.	.	.	.	.	.						T	T	T	T		B	G	G	G	S	.	.	.	.	.
Template Predicted Secondary structure																																		.																						.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	.	.	.	.	.	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T
Query Conservation																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.							.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	D	R	G	R	L	R	E	A	Y	R	L	Q	L	E	Y	P	V	L	D	W	L	G	Q	R	Q	G	K	P	V	Y	D	L	V	S	.	G	A	H	L	E	T	G	A	S	L	V	V	P	C	Y	D	T	S	L	Y	F	D	D	L	H	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	S		B		T	T	T																	T		B					T		.		T	T	S		T	T														B			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
																		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.																		.
Query SS confidence																																																				.	.	.	.	.	.	.	.																		.
Query Sequence		P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	.	.	.	.	.	.	.	.	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R
Query Conservation																																																				.	.	.	.	.	.	.	.																		.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.	.	.	.	.	.																		.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		D	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	V	A	L	X	Q	E	E	A	X	Q	G	Y	A	K	.	G	Q	R	H	F	K	I	K	V	G	R	G	G	R	H	X	P	L	W	E	G	T	K	R	D	I	A	I	V	R	G	I	S	E	V	A	G	P	A	G	K
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	.	T										T	T	T	T	T	S																						T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		144	.	.																				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																														.	.
Query SS confidence																									.																														.	.
Query Sequence		I	T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	.	.	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D
Query Conservation																									.																														.	.
Alig confidence																									.														.	.															.	.													.
Template Conservation																																							.	.																													.
Template Sequence		I	X	I	D	A	N	N	A	Y	N	L	N	L	T	K	E	V	L	A	A	L	S	D	V	N	L	Y	W	L	E	E	A	F	H	E	D	E	.	.	A	L	Y	E	D	L	K	E	W	L	G	Q	R	G	Q	N	V	L	I	A	D	G	E	G	L	A	S	P	.	H	L	I	E	W	A	T	R	G	R	V	D
Template Known Secondary structure							T	T														T	T	T	S								S	S	S				.	.														T										S	S			T	.	T							T	T	S
Template Predicted Secondary structure																																							.	.																													.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	A	D	P	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G
Query Conservation
Alig confidence																																			.																																		.	.	.	.
Template Conservation																																			.																																		.	.	.	.
Template Sequence		V	L	Q	Y	D	I	I	W	P	G	F	T	H	W	X	E	L	G	E	K	L	D	A	H	G	L	R	S	A	P	H	C	Y	.	G	N	A	Y	G	I	Y	A	S	G	H	L	S	A	A	V	R	N	F	E	F	V	E	Y	D	D	I	T	I	E	G	X	D	.	.	.	.	V	S	G	Y	R	I	E	N	G
Template Known Secondary structure						B	T	T	T	B															T	T						B			.	S												T	T	T		T	T	B											T	T			.	.	.	.		T	T					T	T
Template Predicted Secondary structure																																			.																																		.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Q	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	H	V	P	A	T	P	G	F	G	I	V	F	D	D	E	L	V	T	Y	L
Template Known Secondary structure								S	S	B	T	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions