Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 26 Aligned Residues 346 % Identity 22% Template c3my9A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans Resolution 2.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	.	.	.	E	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y	K	N	V	L	T
Query Conservation																																																				.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		V	V	E	R	I	R	I	F	L	V	E	S	P	I	.	.	.	.	.	.	.	.	.	K	M	G	S	V	K	R	V	L	L	E	V	T	S	A	D	G	I	V	G	W	G	E	A	A	P	W	T	P	E	A	A	F	S	A	L	D	I	Y	L	R	P	L	I	L	G	A	P	I	K	R	V	R	E	L	M	A
Template Known Secondary structure		B														.	.	.	.	.	.	.	.	.															T	T	S																					T	T	T					T	T		B	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.										20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T	P	L	P	Y	Q
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	M	D	K	M	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	G	E	A	K	A	A	V	E	M	A	L	L	D	I	L	G	K	A	T	G	L	S	V	A	D	L	L	G	.	G	R	V	R	D	R	I	P	L	S	F	S	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																					T		B	T	T	G	G	G	T	.			S		S				B						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.																.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P	N	G	A	W	S	L	N	E
Query Conservation																																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	F	D	A	D	L	E	R	M	R	A	M	V	P	A	.	G	H	T	V	F	K	M	K	T	G	V	K	P	H	A	E	E	L	R	I	L	E	T	M	R	G	E	F	G	E	R	I	D	L	R	L	D	F	N	Q	A	L	T	P	F	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S												T	T	T	.	T									S	S	S																	G	G	G	S							T	T				T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.
Predicted Secondary structure												.																																																															.
Query SS confidence												.																																																															.
Query Sequence		A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	H	F	.	W	T	M	Q	G	S
Query Conservation												.																																																															.
Alig confidence												.														.	.	.	.																																														.
Template Conservation																										.	.	.	.
Template Sequence		A	M	K	I	L	R	D	V	D	A	F	R	P	T	F	I	E	Q	P	V	P	R	R	H	.	.	.	.	L	D	A	M	A	G	F	A	A	A	L	D	T	P	I	L	A	D	E	S	C	F	D	A	V	D	L	M	E	V	V	R	R	Q	A	A	D	A	I	S	V	K	I	M	K	C	G	G	L	M	K	A
Template Known Secondary structure											T	T			S						S		T	T		.	.	.	.												S	S					S	T	T		S	S											T			S										T	S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G	L	G	V	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	L	M	A	I	A	D	T	A	G	L	P	G	Y	G	G	T	L	W	E	G	G	I	A	L	A	A	G	T	Q	L	I	A	A	T	P	G	I	S	L	G	C	E	F	Y	M	P	H	H	V	L	T	E	D	V	L	E	E	R	I	A	N	S	A	G	H	V	I	V	P	D	G	P	G	L	G	I	S	I
Template Known Secondary structure												T											S													T		T	T	B		S		B			S		T	T	S						S	S	S	S						T	T							S	S	B	T	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		403	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	D	Q	V	M	K	A	H	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	A	S	L	R	G	N	A	K	I
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions