 |
Job Description | P0AES2 | Confidence | 47.67% | Date | Thu Jan 5 11:24:05 GMT 2012 |
Rank | 277 | Aligned Residues | 103 |
% Identity | 10% | Template | c3lmzA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:putative sugar isomerase; |
PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution
|
Resolution | 1.44 Å |
|
 |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
. | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | W | S | L | N | E | A | I | K | I | G | K | Y | L | K | G | . |
S | L | A | Y | A | E | D | P | C | G | A | E | Q | G | F | S | G | R | E | V | M | A | E | F | R | R | A | T | G | L | P | T | A | T | . |
. |
. |
. |
. |
N | M | I | A | T | D | W | R | Q | M | G | H | T | L | S | L | Q | S | V | D | I | P | L |
Query Conservation |   |
  |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|   | . |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|
|
|   | . | . | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
Template Sequence |   |
V | N | F | D | L | D | T | T | L | K | T | L | E | R | L | D | I | H | Y | L | C | I | K | D | F | H | L | P | L | N | S | T | D | E | Q | I | R | A | F | H | D | K | C | A | A | H | K | V | T | G | Y | A | V | G | P | I | Y | X | K | S | E | E | E | I | D | R | A | F | D | Y | A | K | R | V | G | V | K | L | I | V |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T | T | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
  |   |
312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | P | H | F | W | T | M | Q | G | S | V | R | V | A | Q | M | C | H | E | F | G | L | T | W | G | S | H | S | N | N | H |
Query Conservation |   |
  |
|   |   |   |
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|
|   |   |   |
Template Sequence |   |
G | V | P | . |
. |
. |
N | Y | E | L | L | P | Y | V | D | K | K | V | K | E | Y | D | F | H | Y | A | I | H | L | H | G | P |
Template Known Secondary structure |   |
 |  |  | . | . | . |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
|
|
| T |
Template Predicted Secondary structure |   |
 |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | |
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|